Experiment: Carbon source Sucrose 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0273 and moaA are separated by 340 nucleotides moaA and moaC are separated by 112 nucleotides moaC and Shewana3_0276 are separated by 19 nucleotides Shewana3_0276 and Shewana3_0277 are separated by 1 nucleotides
Shewana3_0273: Shewana3_0273 - electron transfer flavoprotein-ubiquinone oxidoreductase (RefSeq), at 307,775 to 309,424
_0273
Shewana3_0274: moaA - molybdenum cofactor biosynthesis protein A (RefSeq), at 309,765 to 310,778
moaA
Shewana3_0275: moaC - molybdenum cofactor biosynthesis protein C (RefSeq), at 310,891 to 311,370
moaC
Shewana3_0276: Shewana3_0276 - molybdopterin synthase subunit MoaD (RefSeq), at 311,390 to 311,641
_0276
Shewana3_0277: Shewana3_0277 - molybdopterin synthase subunit MoaE (RefSeq), at 311,643 to 312,110
_0277
Position (kb) 309
310
311 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 308.901 kb on - strand, within Shewana3_0273 at 309.045 kb on - strand, within Shewana3_0273 at 309.060 kb on + strand, within Shewana3_0273 at 309.317 kb on + strand at 309.362 kb on + strand at 309.512 kb on - strand at 309.539 kb on - strand at 309.540 kb on + strand at 309.597 kb on - strand at 309.610 kb on + strand at 309.642 kb on + strand at 309.733 kb on - strand at 309.880 kb on + strand, within moaA at 309.898 kb on - strand, within moaA at 310.014 kb on - strand, within moaA at 310.024 kb on - strand, within moaA at 310.109 kb on - strand, within moaA at 310.121 kb on - strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.134 kb on + strand, within moaA at 310.142 kb on - strand, within moaA at 310.158 kb on + strand, within moaA at 310.218 kb on + strand, within moaA at 310.402 kb on - strand, within moaA at 310.496 kb on - strand, within moaA at 310.554 kb on - strand, within moaA at 310.573 kb on - strand, within moaA at 310.709 kb on + strand at 310.893 kb on - strand at 310.931 kb on - strand at 311.113 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.189 kb on + strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.197 kb on - strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.280 kb on + strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.288 kb on - strand, within moaC at 311.355 kb on + strand at 311.355 kb on + strand at 311.363 kb on - strand at 311.528 kb on + strand, within Shewana3_0276 at 311.680 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 5 mM remove 308,901 - Shewana3_0273 0.68 -0.4 309,045 - Shewana3_0273 0.77 -0.1 309,060 + Shewana3_0273 0.78 -1.1 309,317 + -0.8 309,362 + -0.9 309,512 - -0.4 309,539 - -0.9 309,540 + -0.3 309,597 - +0.2 309,610 + -0.6 309,642 + -0.1 309,733 - -1.6 309,880 + moaA Shewana3_0274 0.11 -1.3 309,898 - moaA Shewana3_0274 0.13 -2.2 310,014 - moaA Shewana3_0274 0.25 -0.6 310,024 - moaA Shewana3_0274 0.26 -1.6 310,109 - moaA Shewana3_0274 0.34 -0.9 310,121 - moaA Shewana3_0274 0.35 -3.0 310,134 + moaA Shewana3_0274 0.36 -0.9 310,134 + moaA Shewana3_0274 0.36 -0.5 310,134 + moaA Shewana3_0274 0.36 -2.0 310,134 + moaA Shewana3_0274 0.36 -2.0 310,142 - moaA Shewana3_0274 0.37 -1.7 310,158 + moaA Shewana3_0274 0.39 -1.1 310,218 + moaA Shewana3_0274 0.45 -0.8 310,402 - moaA Shewana3_0274 0.63 -1.5 310,496 - moaA Shewana3_0274 0.72 -2.0 310,554 - moaA Shewana3_0274 0.78 -1.6 310,573 - moaA Shewana3_0274 0.80 -3.1 310,709 + +0.5 310,893 - -0.3 310,931 - +0.5 311,113 + moaC Shewana3_0275 0.46 -0.3 311,189 + moaC Shewana3_0275 0.62 -0.5 311,189 + moaC Shewana3_0275 0.62 -1.8 311,189 + moaC Shewana3_0275 0.62 -1.7 311,189 + moaC Shewana3_0275 0.62 -2.3 311,197 - moaC Shewana3_0275 0.64 -2.5 311,197 - moaC Shewana3_0275 0.64 -1.6 311,197 - moaC Shewana3_0275 0.64 -1.8 311,197 - moaC Shewana3_0275 0.64 -1.8 311,280 + moaC Shewana3_0275 0.81 -1.8 311,280 + moaC Shewana3_0275 0.81 -2.3 311,280 + moaC Shewana3_0275 0.81 -0.5 311,280 + moaC Shewana3_0275 0.81 -2.5 311,280 + moaC Shewana3_0275 0.81 -1.7 311,280 + moaC Shewana3_0275 0.81 -0.1 311,280 + moaC Shewana3_0275 0.81 -2.1 311,280 + moaC Shewana3_0275 0.81 +0.1 311,280 + moaC Shewana3_0275 0.81 -1.8 311,288 - moaC Shewana3_0275 0.83 -2.3 311,288 - moaC Shewana3_0275 0.83 -0.9 311,288 - moaC Shewana3_0275 0.83 -1.2 311,288 - moaC Shewana3_0275 0.83 -1.0 311,355 + +1.0 311,355 + +1.0 311,363 - -0.4 311,528 + Shewana3_0276 0.55 -2.4 311,680 + -2.4
Or see this region's nucleotide sequence