Strain Fitness in Shewanella sp. ANA-3 around Shewana3_0024

Experiment: Carbon source Sucrose 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Sucrose 5 mM
28,438	-	fadA	Shewana3_0023	0.16	-1.1
28,445	+	fadA	Shewana3_0023	0.17	+0.3
28,445	+	fadA	Shewana3_0023	0.17	-1.3
28,454	+	fadA	Shewana3_0023	0.17	-0.7
28,464	+	fadA	Shewana3_0023	0.18	-0.3
28,473	-	fadA	Shewana3_0023	0.19	-0.1
28,473	-	fadA	Shewana3_0023	0.19	-0.7
28,473	-	fadA	Shewana3_0023	0.19	+0.7
28,734	+	fadA	Shewana3_0023	0.41	-0.7
28,742	-	fadA	Shewana3_0023	0.42	+0.6
28,804	+	fadA	Shewana3_0023	0.48	-0.8
28,841	-	fadA	Shewana3_0023	0.51	-0.6
28,874	-	fadA	Shewana3_0023	0.54	-0.9
28,903	-	fadA	Shewana3_0023	0.56	-0.0
28,931	+	fadA	Shewana3_0023	0.58	-0.8
28,947	-	fadA	Shewana3_0023	0.60	-0.5
29,012	-	fadA	Shewana3_0023	0.65	-0.2
29,042	-	fadA	Shewana3_0023	0.68	-0.0
29,065	-	fadA	Shewana3_0023	0.70	-0.2
29,220	-	fadA	Shewana3_0023	0.83	-1.0
29,222	-	fadA	Shewana3_0023	0.83	+0.1
29,225	+	fadA	Shewana3_0023	0.84	+0.2
29,233	-	fadA	Shewana3_0023	0.84	-0.7
29,233	-	fadA	Shewana3_0023	0.84	-0.2
29,289	-	fadA	Shewana3_0023	0.89	+1.0
29,297	+	fadA	Shewana3_0023	0.90	+0.3
29,297	+	fadA	Shewana3_0023	0.90	+0.2
29,305	-				-0.2
29,370	+				-0.8
29,370	+				+0.2
29,378	-				-0.5
29,378	-				-0.2
29,378	-				+0.1
29,458	-				+0.1
29,512	-				-0.2
29,560	-				+0.1
29,580	-				-2.0
29,614	-				-0.5
29,655	+	fadB	Shewana3_0024	0.10	-0.9
29,663	-	fadB	Shewana3_0024	0.11	-1.0
29,839	-	fadB	Shewana3_0024	0.19	-0.7
29,976	-	fadB	Shewana3_0024	0.25	-1.0
30,174	+	fadB	Shewana3_0024	0.34	+1.1
30,174	+	fadB	Shewana3_0024	0.34	-0.1
30,179	+	fadB	Shewana3_0024	0.34	-0.5
30,182	-	fadB	Shewana3_0024	0.35	+0.6
30,200	+	fadB	Shewana3_0024	0.35	-0.5
30,227	+	fadB	Shewana3_0024	0.37	-1.1
30,227	+	fadB	Shewana3_0024	0.37	-1.6
30,235	-	fadB	Shewana3_0024	0.37	-0.0
30,235	-	fadB	Shewana3_0024	0.37	-0.4
30,235	-	fadB	Shewana3_0024	0.37	-0.8
30,235	-	fadB	Shewana3_0024	0.37	-0.3
30,430	+	fadB	Shewana3_0024	0.46	-0.1
30,430	+	fadB	Shewana3_0024	0.46	+0.6
30,438	-	fadB	Shewana3_0024	0.47	-0.3
30,521	-	fadB	Shewana3_0024	0.50	-0.1
30,532	+	fadB	Shewana3_0024	0.51	-0.2
30,534	-	fadB	Shewana3_0024	0.51	-1.1
30,842	+	fadB	Shewana3_0024	0.65	-1.2
30,868	+	fadB	Shewana3_0024	0.67	-1.4
30,876	-	fadB	Shewana3_0024	0.67	-0.2
30,884	-	fadB	Shewana3_0024	0.67	-0.0
30,927	-	fadB	Shewana3_0024	0.69	-0.9
30,927	-	fadB	Shewana3_0024	0.69	-0.1
30,927	-	fadB	Shewana3_0024	0.69	+0.2
30,931	+	fadB	Shewana3_0024	0.69	-0.5
30,934	-	fadB	Shewana3_0024	0.70	-0.7
30,939	-	fadB	Shewana3_0024	0.70	-1.0
31,100	-	fadB	Shewana3_0024	0.77	-1.4
31,100	-	fadB	Shewana3_0024	0.77	-4.1
31,290	-	fadB	Shewana3_0024	0.86	-0.7
31,310	+	fadB	Shewana3_0024	0.87	-1.0
31,310	+	fadB	Shewana3_0024	0.87	-0.9
31,310	+	fadB	Shewana3_0024	0.87	-0.9
31,318	-	fadB	Shewana3_0024	0.87	-0.3
31,318	-	fadB	Shewana3_0024	0.87	-0.2
31,328	-	fadB	Shewana3_0024	0.88	+0.1
31,328	-	fadB	Shewana3_0024	0.88	-1.1
31,333	+	fadB	Shewana3_0024	0.88	-1.3
31,343	+	fadB	Shewana3_0024	0.89	-0.4
31,343	+	fadB	Shewana3_0024	0.89	+0.1
31,343	+	fadB	Shewana3_0024	0.89	+0.8
31,456	+				-0.8
31,464	-				-2.3
31,490	-				+0.1
31,490	-				+0.4
31,639	+				-0.3
31,780	+				-0.4
31,780	+				-0.8
31,785	+				+0.0
31,797	+				+0.4
31,797	+				-0.2
31,805	-				+0.6
31,805	-				-0.3
31,861	-				+0.6
32,028	-				+1.0
32,028	-				+0.3
32,051	-				-0.0
32,103	+				-0.3
32,203	-		Shewana3_0025	0.13	-0.0
32,324	+		Shewana3_0025	0.22	+1.1
32,324	+		Shewana3_0025	0.22	-0.1
32,357	+		Shewana3_0025	0.25	+0.6
32,433	-		Shewana3_0025	0.30	-0.4
32,529	+		Shewana3_0025	0.38	-0.1
32,539	+		Shewana3_0025	0.38	-0.8