Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0467 and BT0468 are separated by 26 nucleotides BT0468 and BT0469 are separated by 38 nucleotides
BT0467: BT0467 - conserved hypothetical protein (NCBI ptt file), at 577,559 to 579,028
BT0467
BT0468: BT0468 - putative F420H2-dehydrogenase 40 kDa subunit (NCBI ptt file), at 579,055 to 580,221
BT0468
BT0469: BT0469 - hypothetical protein (NCBI ptt file), at 580,260 to 581,522
BT0469
Position (kb) 579
580
581 Strain fitness (log2 ratio) -2
-1
0
1
2 at 578.112 kb on - strand, within BT0467 at 578.362 kb on - strand, within BT0467 at 578.391 kb on + strand, within BT0467 at 578.392 kb on - strand, within BT0467 at 578.402 kb on - strand, within BT0467 at 578.406 kb on - strand, within BT0467 at 578.406 kb on - strand, within BT0467 at 578.406 kb on - strand, within BT0467 at 578.413 kb on + strand, within BT0467 at 578.414 kb on - strand, within BT0467 at 578.486 kb on - strand, within BT0467 at 578.538 kb on + strand, within BT0467 at 578.638 kb on - strand, within BT0467 at 578.643 kb on + strand, within BT0467 at 578.644 kb on - strand, within BT0467 at 578.679 kb on - strand, within BT0467 at 578.679 kb on - strand, within BT0467 at 578.683 kb on - strand, within BT0467 at 578.729 kb on - strand, within BT0467 at 578.777 kb on - strand, within BT0467 at 578.828 kb on - strand, within BT0467 at 578.865 kb on - strand, within BT0467 at 578.927 kb on - strand at 578.927 kb on - strand at 578.932 kb on - strand at 578.932 kb on - strand at 579.180 kb on + strand, within BT0468 at 579.334 kb on - strand, within BT0468 at 579.347 kb on + strand, within BT0468 at 579.503 kb on - strand, within BT0468 at 579.551 kb on + strand, within BT0468 at 579.577 kb on - strand, within BT0468 at 579.637 kb on - strand, within BT0468 at 579.639 kb on - strand, within BT0468 at 579.641 kb on - strand, within BT0468 at 580.026 kb on - strand, within BT0468 at 580.074 kb on + strand, within BT0468 at 580.135 kb on - strand at 580.287 kb on - strand at 580.287 kb on - strand at 580.304 kb on + strand at 580.356 kb on + strand at 580.428 kb on - strand, within BT0469 at 580.468 kb on - strand, within BT0469 at 580.472 kb on + strand, within BT0469 at 580.472 kb on + strand, within BT0469 at 580.473 kb on - strand, within BT0469 at 580.503 kb on - strand, within BT0469 at 580.513 kb on - strand, within BT0469 at 580.524 kb on - strand, within BT0469 at 580.606 kb on - strand, within BT0469 at 580.639 kb on + strand, within BT0469 at 580.889 kb on - strand, within BT0469 at 580.988 kb on - strand, within BT0469 at 581.052 kb on - strand, within BT0469 at 581.089 kb on - strand, within BT0469
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 578,112 - BT0467 0.38 -1.0 578,362 - BT0467 0.55 -0.9 578,391 + BT0467 0.57 -0.9 578,392 - BT0467 0.57 +1.9 578,402 - BT0467 0.57 -2.2 578,406 - BT0467 0.58 -1.2 578,406 - BT0467 0.58 +0.7 578,406 - BT0467 0.58 -2.5 578,413 + BT0467 0.58 -0.9 578,414 - BT0467 0.58 -0.1 578,486 - BT0467 0.63 -0.6 578,538 + BT0467 0.67 -0.4 578,638 - BT0467 0.73 +0.1 578,643 + BT0467 0.74 +0.5 578,644 - BT0467 0.74 -0.2 578,679 - BT0467 0.76 -0.2 578,679 - BT0467 0.76 -1.1 578,683 - BT0467 0.76 -2.5 578,729 - BT0467 0.80 -1.2 578,777 - BT0467 0.83 -1.5 578,828 - BT0467 0.86 +1.5 578,865 - BT0467 0.89 -0.8 578,927 - -0.4 578,927 - -1.2 578,932 - -1.1 578,932 - -1.1 579,180 + BT0468 0.11 -0.1 579,334 - BT0468 0.24 +1.5 579,347 + BT0468 0.25 -2.2 579,503 - BT0468 0.38 +0.5 579,551 + BT0468 0.43 -0.5 579,577 - BT0468 0.45 -0.9 579,637 - BT0468 0.50 +0.0 579,639 - BT0468 0.50 -1.1 579,641 - BT0468 0.50 -1.1 580,026 - BT0468 0.83 -1.4 580,074 + BT0468 0.87 -2.2 580,135 - -0.5 580,287 - +0.5 580,287 - -1.0 580,304 + +0.5 580,356 + +0.1 580,428 - BT0469 0.13 -0.1 580,468 - BT0469 0.16 +2.2 580,472 + BT0469 0.17 -0.1 580,472 + BT0469 0.17 -1.5 580,473 - BT0469 0.17 -0.5 580,503 - BT0469 0.19 -2.1 580,513 - BT0469 0.20 -0.9 580,524 - BT0469 0.21 -2.3 580,606 - BT0469 0.27 -1.0 580,639 + BT0469 0.30 -1.3 580,889 - BT0469 0.50 +0.9 580,988 - BT0469 0.58 -0.9 581,052 - BT0469 0.63 -0.9 581,089 - BT0469 0.66 -0.3
Or see this region's nucleotide sequence