Strain Fitness in Pantoea sp. MT58 around IAI47_11045

Experiment: Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4; TreatmentDuration=0.5hrs; Outgrowth=LBkan50
2,327,240	+				-0.6
2,327,241	-				+0.1
2,327,279	+				+0.7
2,327,288	+				-0.9
2,327,312	+				+0.0
2,327,312	+				+0.5
2,327,313	-				-0.5
2,327,333	-				+0.6
2,327,355	+				-2.4
2,327,355	+				-1.8
2,327,355	+				+0.4
2,327,356	-				+0.9
2,327,356	-				+1.4
2,327,356	-				-0.5
2,327,358	+				+0.9
2,327,358	+				+0.4
2,327,358	+				-2.3
2,327,359	-				+0.0
2,327,359	-				-0.3
2,327,582	+		IAI47_11035	0.51	+2.0
2,327,582	+		IAI47_11035	0.51	-0.3
2,327,582	+		IAI47_11035	0.51	-1.0
2,327,582	+		IAI47_11035	0.51	-3.2
2,327,582	+		IAI47_11035	0.51	+1.4
2,327,582	+		IAI47_11035	0.51	-1.0
2,327,582	+		IAI47_11035	0.51	+0.9
2,327,582	+		IAI47_11035	0.51	-0.3
2,327,582	+		IAI47_11035	0.51	-2.0
2,327,582	+		IAI47_11035	0.51	-0.2
2,327,583	-		IAI47_11035	0.51	-0.0
2,327,583	-		IAI47_11035	0.51	-0.9
2,327,583	-		IAI47_11035	0.51	+0.1
2,327,583	-		IAI47_11035	0.51	+1.4
2,327,585	+		IAI47_11035	0.51	-0.6
2,327,585	+		IAI47_11035	0.51	-1.7
2,327,585	+		IAI47_11035	0.51	-1.8
2,327,585	+		IAI47_11035	0.51	+1.6
2,327,585	+		IAI47_11035	0.51	-0.1
2,327,585	+		IAI47_11035	0.51	-2.5
2,327,586	-		IAI47_11035	0.52	-0.6
2,327,586	-		IAI47_11035	0.52	+1.5
2,327,586	-		IAI47_11035	0.52	-1.8
2,327,603	+		IAI47_11035	0.56	-2.2
2,327,603	+		IAI47_11035	0.56	-0.1
2,327,603	+		IAI47_11035	0.56	+1.7
2,327,603	+		IAI47_11035	0.56	+2.2
2,327,603	+		IAI47_11035	0.56	+0.0
2,327,603	+		IAI47_11035	0.56	+1.0
2,327,603	+		IAI47_11035	0.56	-0.4
2,327,604	-		IAI47_11035	0.56	-0.4
2,327,604	-		IAI47_11035	0.56	-1.0
2,327,604	-		IAI47_11035	0.56	-2.6
2,327,604	-		IAI47_11035	0.56	-0.1
2,327,606	+		IAI47_11035	0.57	+2.7
2,327,607	-		IAI47_11035	0.57	+1.8
2,327,607	-		IAI47_11035	0.57	+2.2
2,327,607	-		IAI47_11035	0.57	+0.2
2,327,627	+		IAI47_11035	0.62	+0.9
2,327,627	+		IAI47_11035	0.62	-0.1
2,327,627	+		IAI47_11035	0.62	+1.6
2,327,627	+		IAI47_11035	0.62	+0.3
2,327,627	+		IAI47_11035	0.62	-1.5
2,327,627	+		IAI47_11035	0.62	-0.4
2,327,627	+		IAI47_11035	0.62	+0.4
2,327,627	+		IAI47_11035	0.62	+2.2
2,327,627	+		IAI47_11035	0.62	-0.3
2,327,627	+		IAI47_11035	0.62	-2.7
2,327,628	-		IAI47_11035	0.62	-1.4
2,327,628	-		IAI47_11035	0.62	-0.1
2,327,628	-		IAI47_11035	0.62	-1.8
2,327,628	-		IAI47_11035	0.62	+0.3
2,327,628	-		IAI47_11035	0.62	-0.4
2,327,637	+		IAI47_11035	0.64	-1.8
2,327,637	+		IAI47_11035	0.64	-0.2
2,327,638	-		IAI47_11035	0.64	+1.1
2,327,638	-		IAI47_11035	0.64	-0.2
2,327,690	-		IAI47_11035	0.77	+0.9
2,327,705	+		IAI47_11035	0.81	-1.0
2,327,705	+		IAI47_11035	0.81	+2.0
2,327,705	+		IAI47_11035	0.81	-1.6
2,327,705	+		IAI47_11035	0.81	+1.1
2,327,706	-		IAI47_11035	0.81	-0.2
2,327,706	-		IAI47_11035	0.81	-0.2
2,327,706	-		IAI47_11035	0.81	-1.2
2,327,706	-		IAI47_11035	0.81	-0.3
2,327,706	-		IAI47_11035	0.81	-1.2
2,327,706	-		IAI47_11035	0.81	-3.3
2,327,739	+		IAI47_11035	0.89	+0.4
2,327,750	+				-0.2
2,327,750	+				+1.2
2,327,750	+				+2.2
2,327,750	+				+0.9
2,327,750	+				-1.0
2,327,750	+				-1.9
2,327,750	+				-2.3
2,327,750	+				+0.5
2,327,751	-				+0.9
2,327,780	+				-1.1
2,327,780	+				-1.7
2,327,780	+				+1.1
2,327,780	+				+1.6
2,327,781	-				-0.6
2,327,781	-				-1.6
2,327,781	-				-0.4
2,327,827	-				-2.4
2,327,827	-				+1.4
2,327,829	+				-1.3
2,327,849	+				-0.0
2,327,849	+				-2.2
2,327,850	-				+0.1
2,327,869	+				-1.0
2,327,876	+				+1.2
2,327,876	+				+0.5
2,327,877	-				-0.1
2,327,877	-				-2.2
2,327,877	-				+3.4
2,327,877	-				-1.0
2,327,877	-				+2.8
2,327,900	+		IAI47_11040	0.15	+0.4
2,327,900	+		IAI47_11040	0.15	+0.4
2,327,901	-		IAI47_11040	0.16	+1.3
2,327,901	-		IAI47_11040	0.16	-0.0
2,327,901	-		IAI47_11040	0.16	-0.5
2,327,927	+		IAI47_11040	0.24	+1.4
2,327,928	-		IAI47_11040	0.24	-1.6
2,327,928	-		IAI47_11040	0.24	-1.6
2,327,939	+		IAI47_11040	0.27	+0.1
2,327,940	-		IAI47_11040	0.27	+0.7
2,327,975	+		IAI47_11040	0.38	-0.2
2,327,975	+		IAI47_11040	0.38	+0.6
2,327,975	+		IAI47_11040	0.38	-1.4
2,327,975	+		IAI47_11040	0.38	+0.4
2,327,975	+		IAI47_11040	0.38	-1.4
2,327,976	-		IAI47_11040	0.38	+2.6
2,327,976	-		IAI47_11040	0.38	+1.9
2,328,018	+		IAI47_11040	0.51	-2.3
2,328,018	+		IAI47_11040	0.51	+0.4
2,328,019	-		IAI47_11040	0.51	+0.4
2,328,061	-		IAI47_11040	0.63	-1.8
2,328,069	+		IAI47_11040	0.66	+2.8
2,328,069	+		IAI47_11040	0.66	+1.4
2,328,069	+		IAI47_11040	0.66	+1.9
2,328,070	-		IAI47_11040	0.66	+0.4
2,328,090	+		IAI47_11040	0.72	-0.2
2,328,090	+		IAI47_11040	0.72	-3.6
2,328,098	+		IAI47_11040	0.74	-0.1
2,328,098	+		IAI47_11040	0.74	+0.5
2,328,098	+		IAI47_11040	0.74	+0.4
2,328,098	+		IAI47_11040	0.74	+0.8
2,328,099	-		IAI47_11040	0.75	+1.8
2,328,099	-		IAI47_11040	0.75	-1.3
2,328,116	+		IAI47_11040	0.80	-0.9
2,328,117	-		IAI47_11040	0.80	+1.0
2,328,117	-		IAI47_11040	0.80	+2.2
2,328,117	-		IAI47_11040	0.80	+0.0
2,328,123	+		IAI47_11040	0.82	+4.1
2,328,123	+		IAI47_11040	0.82	-0.4
2,328,124	-		IAI47_11040	0.82	+1.5
2,328,124	-		IAI47_11040	0.82	-0.4
2,328,162	+				-3.5
2,328,162	+				-1.6
2,328,177	+				-2.3
2,328,200	+				+0.6
2,328,200	+				-0.2
2,328,200	+				-1.0
2,328,200	+				+2.0
2,328,200	+				+3.3
2,328,200	+				-1.2
2,328,200	+				-0.9
2,328,200	+				+0.6
2,328,201	-				+1.2
2,328,201	-				+0.6
2,328,230	+				+0.4
2,328,231	-				-1.0
2,328,231	-				+1.4
2,328,242	+				-3.1
2,328,251	+		IAI47_11045	0.10	-0.2
2,328,252	-		IAI47_11045	0.11	-1.4
2,328,264	+		IAI47_11045	0.18	+0.4
2,328,264	+		IAI47_11045	0.18	-1.0
2,328,264	+		IAI47_11045	0.18	+1.6
2,328,265	-		IAI47_11045	0.18	-0.5
2,328,265	-		IAI47_11045	0.18	-2.3
2,328,326	+		IAI47_11045	0.53	-0.5
2,328,327	-		IAI47_11045	0.54	-2.4
2,328,327	-		IAI47_11045	0.54	-1.1
2,328,327	-		IAI47_11045	0.54	+1.4
2,328,327	-		IAI47_11045	0.54	+0.4
2,328,327	-		IAI47_11045	0.54	+0.8
2,328,327	-		IAI47_11045	0.54	+0.9
2,328,327	-		IAI47_11045	0.54	+1.0
2,328,327	-		IAI47_11045	0.54	-1.0
2,328,327	-		IAI47_11045	0.54	+0.8
2,328,327	-		IAI47_11045	0.54	-2.3
2,328,327	-		IAI47_11045	0.54	+1.4
2,328,410	+				+1.3
2,328,410	+				-0.2
2,328,512	+				-1.0
2,328,512	+				-0.2
2,328,513	-				+2.4
2,328,521	-				-0.6
2,328,556	+				+1.4
2,328,566	+				+1.2
2,328,567	-				+0.6
2,328,567	-				-3.6
2,328,567	-				-1.0
2,328,567	-				+0.4
2,328,714	+		IAI47_11050	0.20	-2.1
2,328,729	+		IAI47_11050	0.21	+0.4
2,328,729	+		IAI47_11050	0.21	+3.2
2,328,730	-		IAI47_11050	0.21	-0.5
2,328,810	+		IAI47_11050	0.28	+0.5
2,328,810	+		IAI47_11050	0.28	-2.3
2,328,856	+		IAI47_11050	0.31	-0.7
2,328,857	-		IAI47_11050	0.32	-1.0
2,328,857	-		IAI47_11050	0.32	-1.4
2,328,857	-		IAI47_11050	0.32	-1.8
2,328,860	+		IAI47_11050	0.32	-1.2
2,328,860	+		IAI47_11050	0.32	-1.4
2,328,860	+		IAI47_11050	0.32	+1.7
2,328,860	+		IAI47_11050	0.32	+2.0
2,328,860	+		IAI47_11050	0.32	-0.1
2,328,860	+		IAI47_11050	0.32	+0.9
2,328,860	+		IAI47_11050	0.32	-0.6
2,328,860	+		IAI47_11050	0.32	+1.4
2,328,860	+		IAI47_11050	0.32	-1.1
2,328,860	+		IAI47_11050	0.32	+1.0
2,328,861	-		IAI47_11050	0.32	-2.2
2,328,861	-		IAI47_11050	0.32	+0.6
2,328,861	-		IAI47_11050	0.32	+1.4
2,328,861	-		IAI47_11050	0.32	-1.9
2,328,861	-		IAI47_11050	0.32	+1.2
2,328,861	-		IAI47_11050	0.32	+0.9
2,328,861	-		IAI47_11050	0.32	-0.5
2,328,861	-		IAI47_11050	0.32	-0.9
2,328,861	-		IAI47_11050	0.32	-0.7
2,328,861	-		IAI47_11050	0.32	-0.2
2,328,861	-		IAI47_11050	0.32	+0.0
2,328,861	-		IAI47_11050	0.32	-2.0
2,328,861	-		IAI47_11050	0.32	+0.8
2,328,861	-		IAI47_11050	0.32	-0.2
2,328,861	-		IAI47_11050	0.32	-3.0
2,328,960	+		IAI47_11050	0.40	-1.1
2,328,960	+		IAI47_11050	0.40	-0.9
2,328,987	+		IAI47_11050	0.43	+0.6
2,329,089	-		IAI47_11050	0.51	-0.5
2,329,126	+		IAI47_11050	0.54	+0.8
2,329,127	-		IAI47_11050	0.54	+0.2
2,329,153	+		IAI47_11050	0.56	-0.2
2,329,153	+		IAI47_11050	0.56	+0.2
2,329,153	+		IAI47_11050	0.56	+1.2
2,329,153	+		IAI47_11050	0.56	-2.1
2,329,154	-		IAI47_11050	0.57	+1.4
2,329,154	-		IAI47_11050	0.57	-1.0
2,329,154	-		IAI47_11050	0.57	-0.8
2,329,175	+		IAI47_11050	0.58	-0.1
2,329,176	-		IAI47_11050	0.58	+1.4
2,329,176	-		IAI47_11050	0.58	+1.4
2,329,176	-		IAI47_11050	0.58	+1.8
2,329,177	+		IAI47_11050	0.59	+1.5
2,329,177	+		IAI47_11050	0.59	-0.4
2,329,211	+		IAI47_11050	0.61	-0.6
2,329,211	+		IAI47_11050	0.61	-1.3
2,329,212	-		IAI47_11050	0.61	-0.2
2,329,234	+		IAI47_11050	0.63	+0.1
2,329,234	+		IAI47_11050	0.63	+0.5
2,329,235	-		IAI47_11050	0.63	+1.2
2,329,235	-		IAI47_11050	0.63	+0.0
2,329,235	-		IAI47_11050	0.63	-0.3
2,329,360	+		IAI47_11050	0.74	+0.4
2,329,361	-		IAI47_11050	0.74	-0.4
2,329,386	+		IAI47_11050	0.76	-1.2