Experiment: ALP with Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3468 and Dsui_3469 overlap by 4 nucleotides Dsui_3469 and Dsui_3470 are separated by 195 nucleotides Dsui_3470 and Dsui_3471 overlap by 4 nucleotides
Dsui_3468: Dsui_3468 - Response regulator receiver domain protein,histidine kinase, at 3,731,620 to 3,732,789
_3468
Dsui_3469: Dsui_3469 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,732,786 to 3,733,415
_3469
Dsui_3470: Dsui_3470 - response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,733,611 to 3,734,009
_3470
Dsui_3471: Dsui_3471 - methyl-accepting chemotaxis protein, at 3,734,006 to 3,735,151
_3471
Position (kb)
3732
3733
3734 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3731.844 kb on + strand, within Dsui_3468 at 3731.852 kb on - strand at 3731.881 kb on + strand, within Dsui_3468 at 3731.961 kb on + strand, within Dsui_3468 at 3732.001 kb on - strand at 3732.307 kb on + strand, within Dsui_3468 at 3732.315 kb on - strand, within Dsui_3468 at 3732.409 kb on + strand, within Dsui_3468 at 3732.513 kb on + strand, within Dsui_3468 at 3732.545 kb on - strand at 3732.550 kb on - strand, within Dsui_3468 at 3732.570 kb on + strand, within Dsui_3468 at 3732.627 kb on + strand, within Dsui_3468 at 3732.643 kb on - strand at 3732.659 kb on - strand at 3732.665 kb on + strand, within Dsui_3468 at 3732.900 kb on + strand, within Dsui_3469 at 3732.970 kb on + strand, within Dsui_3469 at 3733.063 kb on - strand, within Dsui_3469 at 3733.324 kb on - strand, within Dsui_3469 at 3733.386 kb on + strand at 3733.394 kb on - strand at 3733.542 kb on - strand at 3734.045 kb on - strand at 3734.045 kb on - strand at 3734.072 kb on - strand at 3734.137 kb on + strand at 3734.209 kb on + strand at 3734.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.2 mM remove 3,731,844 + Dsui_3468 0.19 -1.5 3,731,852 - +0.7 3,731,881 + Dsui_3468 0.22 -3.2 3,731,961 + Dsui_3468 0.29 -0.6 3,732,001 - +0.7 3,732,307 + Dsui_3468 0.59 +0.7 3,732,315 - Dsui_3468 0.59 +0.7 3,732,409 + Dsui_3468 0.67 -1.0 3,732,513 + Dsui_3468 0.76 -0.3 3,732,545 - -0.3 3,732,550 - Dsui_3468 0.79 -0.3 3,732,570 + Dsui_3468 0.81 -1.6 3,732,627 + Dsui_3468 0.86 -0.9 3,732,643 - +0.7 3,732,659 - +0.7 3,732,665 + Dsui_3468 0.89 -2.1 3,732,900 + Dsui_3469 0.18 -1.3 3,732,970 + Dsui_3469 0.29 -0.3 3,733,063 - Dsui_3469 0.44 +0.7 3,733,324 - Dsui_3469 0.85 -0.3 3,733,386 + +0.7 3,733,394 - +0.7 3,733,542 - +0.7 3,734,045 - +0.7 3,734,045 - -1.3 3,734,072 - -0.3 3,734,137 + -0.3 3,734,209 + -0.3 3,734,279 - -0.3
Or see this region's nucleotide sequence