Experiment: ALP with Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1465 and Dsui_1466 are separated by 963 nucleotides Dsui_1466 and Dsui_1467 are separated by 2 nucleotides
Dsui_1465: Dsui_1465 - hypothetical protein, at 1,526,370 to 1,527,881
_1465
Dsui_1466: Dsui_1466 - ABC-type transport system, involved in lipoprotein release, permease component, at 1,528,845 to 1,530,005
_1466
Dsui_1467: Dsui_1467 - ABC-type transport system, involved in lipoprotein release, permease component, at 1,530,008 to 1,531,186
_1467
Position (kb)
1528
1529
1530
1531 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1527.866 kb on + strand at 1527.866 kb on - strand at 1527.896 kb on - strand at 1527.901 kb on + strand at 1527.902 kb on - strand at 1527.903 kb on + strand at 1527.945 kb on + strand at 1527.949 kb on - strand at 1527.958 kb on - strand at 1527.967 kb on - strand at 1527.982 kb on + strand at 1528.003 kb on + strand at 1528.006 kb on + strand at 1528.009 kb on - strand at 1528.009 kb on - strand at 1528.014 kb on + strand at 1528.014 kb on + strand at 1528.014 kb on + strand at 1528.022 kb on - strand at 1528.022 kb on - strand at 1528.022 kb on - strand at 1528.069 kb on - strand at 1528.071 kb on + strand at 1528.081 kb on + strand at 1528.089 kb on - strand at 1528.102 kb on + strand at 1528.102 kb on + strand at 1528.128 kb on + strand at 1528.136 kb on - strand at 1528.136 kb on - strand at 1528.169 kb on + strand at 1528.169 kb on + strand at 1528.169 kb on + strand at 1528.177 kb on - strand at 1528.177 kb on - strand at 1528.177 kb on - strand at 1528.177 kb on - strand at 1528.177 kb on - strand at 1528.201 kb on + strand at 1528.201 kb on + strand at 1528.201 kb on + strand at 1528.201 kb on + strand at 1528.201 kb on + strand at 1528.209 kb on - strand at 1528.209 kb on - strand at 1528.232 kb on + strand at 1528.232 kb on + strand at 1528.232 kb on + strand at 1528.232 kb on + strand at 1528.240 kb on - strand at 1528.250 kb on + strand at 1528.284 kb on - strand at 1528.342 kb on + strand at 1528.342 kb on + strand at 1528.350 kb on - strand at 1528.368 kb on - strand at 1528.384 kb on + strand at 1528.384 kb on + strand at 1528.384 kb on + strand at 1528.384 kb on + strand at 1528.384 kb on + strand at 1528.392 kb on - strand at 1528.392 kb on - strand at 1528.392 kb on - strand at 1528.392 kb on - strand at 1528.396 kb on + strand at 1528.406 kb on + strand at 1528.411 kb on + strand at 1528.414 kb on - strand at 1528.416 kb on + strand at 1528.418 kb on + strand at 1528.418 kb on + strand at 1528.418 kb on + strand at 1528.426 kb on - strand at 1528.438 kb on - strand at 1528.439 kb on - strand at 1528.458 kb on + strand at 1528.466 kb on + strand at 1528.539 kb on - strand at 1528.543 kb on + strand at 1528.551 kb on - strand at 1528.567 kb on + strand at 1528.568 kb on - strand at 1528.568 kb on - strand at 1528.568 kb on - strand at 1528.586 kb on + strand at 1528.587 kb on + strand at 1528.605 kb on - strand at 1528.610 kb on + strand at 1528.620 kb on + strand at 1528.620 kb on + strand at 1528.628 kb on - strand at 1528.628 kb on - strand at 1528.639 kb on - strand at 1528.690 kb on - strand at 1528.732 kb on - strand at 1528.767 kb on + strand at 1528.767 kb on + strand at 1528.783 kb on + strand at 1528.795 kb on - strand at 1528.797 kb on + strand at 1528.797 kb on + strand at 1528.797 kb on + strand at 1528.797 kb on + strand at 1528.864 kb on + strand at 1528.912 kb on + strand at 1528.929 kb on - strand at 1528.942 kb on + strand at 1528.952 kb on + strand at 1528.960 kb on - strand at 1528.963 kb on - strand, within Dsui_1466 at 1528.968 kb on - strand, within Dsui_1466 at 1529.049 kb on + strand, within Dsui_1466 at 1529.057 kb on - strand, within Dsui_1466 at 1529.057 kb on - strand, within Dsui_1466 at 1529.087 kb on + strand, within Dsui_1466 at 1529.087 kb on + strand, within Dsui_1466 at 1529.096 kb on - strand, within Dsui_1466 at 1529.176 kb on + strand, within Dsui_1466 at 1529.176 kb on + strand, within Dsui_1466 at 1529.186 kb on + strand, within Dsui_1466 at 1529.223 kb on + strand, within Dsui_1466 at 1529.306 kb on + strand, within Dsui_1466 at 1529.473 kb on - strand, within Dsui_1466 at 1529.555 kb on - strand, within Dsui_1466 at 1529.675 kb on + strand, within Dsui_1466 at 1529.681 kb on + strand, within Dsui_1466 at 1529.839 kb on + strand, within Dsui_1466 at 1529.893 kb on + strand at 1529.900 kb on + strand at 1530.034 kb on + strand at 1530.047 kb on - strand at 1530.089 kb on - strand at 1530.179 kb on - strand, within Dsui_1467 at 1530.393 kb on + strand, within Dsui_1467 at 1530.537 kb on + strand, within Dsui_1467 at 1530.545 kb on - strand, within Dsui_1467 at 1530.545 kb on - strand, within Dsui_1467 at 1530.586 kb on + strand, within Dsui_1467 at 1530.595 kb on - strand, within Dsui_1467 at 1530.742 kb on + strand, within Dsui_1467 at 1530.750 kb on - strand, within Dsui_1467 at 1530.775 kb on + strand, within Dsui_1467 at 1530.800 kb on - strand, within Dsui_1467 at 1530.880 kb on + strand, within Dsui_1467 at 1530.904 kb on - strand at 1530.996 kb on - strand, within Dsui_1467
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.2 mM remove 1,527,866 + -0.4 1,527,866 - +0.7 1,527,896 - +0.7 1,527,901 + +0.7 1,527,902 - -1.3 1,527,903 + +0.7 1,527,945 + -1.6 1,527,949 - -2.8 1,527,958 - +0.7 1,527,967 - -1.3 1,527,982 + +0.7 1,528,003 + -0.3 1,528,006 + +0.7 1,528,009 - +0.7 1,528,009 - -1.3 1,528,014 + -1.6 1,528,014 + -1.3 1,528,014 + +0.7 1,528,022 - +0.7 1,528,022 - +0.7 1,528,022 - +0.7 1,528,069 - +0.7 1,528,071 + -1.6 1,528,081 + +0.7 1,528,089 - -0.3 1,528,102 + -0.9 1,528,102 + +0.7 1,528,128 + -0.9 1,528,136 - +0.7 1,528,136 - -0.3 1,528,169 + +0.7 1,528,169 + +0.7 1,528,169 + +0.7 1,528,177 - -1.9 1,528,177 - +0.7 1,528,177 - +0.7 1,528,177 - -0.9 1,528,177 - -0.3 1,528,201 + +0.7 1,528,201 + -0.3 1,528,201 + +0.7 1,528,201 + +0.7 1,528,201 + +0.7 1,528,209 - -0.3 1,528,209 - -0.3 1,528,232 + +0.7 1,528,232 + +0.7 1,528,232 + +0.7 1,528,232 + +0.7 1,528,240 - -1.3 1,528,250 + -2.1 1,528,284 - -2.1 1,528,342 + +0.7 1,528,342 + +0.7 1,528,350 - -0.3 1,528,368 - -0.9 1,528,384 + -0.3 1,528,384 + +0.7 1,528,384 + -0.3 1,528,384 + -0.3 1,528,384 + -0.3 1,528,392 - -0.9 1,528,392 - +0.7 1,528,392 - +0.7 1,528,392 - +0.7 1,528,396 + -0.3 1,528,406 + +0.7 1,528,411 + -1.6 1,528,414 - +0.7 1,528,416 + -0.3 1,528,418 + -0.3 1,528,418 + -0.3 1,528,418 + -1.3 1,528,426 - +0.7 1,528,438 - +0.7 1,528,439 - -0.3 1,528,458 + -2.3 1,528,466 + -1.3 1,528,539 - -1.6 1,528,543 + +0.7 1,528,551 - -1.6 1,528,567 + -0.3 1,528,568 - -0.9 1,528,568 - +0.7 1,528,568 - +0.7 1,528,586 + +0.7 1,528,587 + +0.7 1,528,605 - +0.7 1,528,610 + -0.3 1,528,620 + -1.3 1,528,620 + -0.5 1,528,628 - -1.6 1,528,628 - -1.6 1,528,639 - +0.7 1,528,690 - +0.7 1,528,732 - +0.7 1,528,767 + +0.7 1,528,767 + +0.7 1,528,783 + -0.3 1,528,795 - -0.9 1,528,797 + +0.7 1,528,797 + -0.3 1,528,797 + +0.7 1,528,797 + +0.7 1,528,864 + -0.9 1,528,912 + +0.7 1,528,929 - -0.9 1,528,942 + -0.3 1,528,952 + -0.9 1,528,960 - +0.7 1,528,963 - Dsui_1466 0.10 -2.1 1,528,968 - Dsui_1466 0.11 -0.3 1,529,049 + Dsui_1466 0.18 -0.3 1,529,057 - Dsui_1466 0.18 +0.7 1,529,057 - Dsui_1466 0.18 -0.3 1,529,087 + Dsui_1466 0.21 -0.3 1,529,087 + Dsui_1466 0.21 -0.9 1,529,096 - Dsui_1466 0.22 -0.9 1,529,176 + Dsui_1466 0.29 -0.4 1,529,176 + Dsui_1466 0.29 -1.2 1,529,186 + Dsui_1466 0.29 -0.9 1,529,223 + Dsui_1466 0.33 -1.1 1,529,306 + Dsui_1466 0.40 +0.3 1,529,473 - Dsui_1466 0.54 -0.3 1,529,555 - Dsui_1466 0.61 -0.9 1,529,675 + Dsui_1466 0.71 -1.9 1,529,681 + Dsui_1466 0.72 +0.3 1,529,839 + Dsui_1466 0.86 -0.3 1,529,893 + -1.3 1,529,900 + -1.1 1,530,034 + -1.1 1,530,047 - -1.3 1,530,089 - -0.9 1,530,179 - Dsui_1467 0.15 +0.7 1,530,393 + Dsui_1467 0.33 -1.6 1,530,537 + Dsui_1467 0.45 -1.8 1,530,545 - Dsui_1467 0.46 +0.7 1,530,545 - Dsui_1467 0.46 -0.3 1,530,586 + Dsui_1467 0.49 -1.3 1,530,595 - Dsui_1467 0.50 -0.3 1,530,742 + Dsui_1467 0.62 -0.6 1,530,750 - Dsui_1467 0.63 -0.9 1,530,775 + Dsui_1467 0.65 -0.9 1,530,800 - Dsui_1467 0.67 -0.3 1,530,880 + Dsui_1467 0.74 -0.6 1,530,904 - +0.7 1,530,996 - Dsui_1467 0.84 -0.3
Or see this region's nucleotide sequence