Experiment: ALP with Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0971 and Dsui_0972 are separated by 18 nucleotides Dsui_0972 and Dsui_0973 are separated by 236 nucleotides Dsui_0973 and Dsui_0974 are separated by 85 nucleotides
Dsui_0971: Dsui_0971 - poly(R)-hydroxyalkanoic acid synthase, class I, at 996,840 to 998,669
_0971
Dsui_0972: Dsui_0972 - Zn-dependent hydrolase, glyoxylase, at 998,688 to 999,722
_0972
Dsui_0973: Dsui_0973 - putative transcriptional regulator, at 999,959 to 1,000,429
_0973
Dsui_0974: Dsui_0974 - hypothetical protein, at 1,000,515 to 1,000,979
_0974
Position (kb) 998
999
1000 Strain fitness (log2 ratio) -2
-1
0
1 at 997.821 kb on - strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.862 kb on + strand, within Dsui_0971 at 997.902 kb on + strand, within Dsui_0971 at 997.944 kb on - strand, within Dsui_0971 at 997.949 kb on - strand, within Dsui_0971 at 998.020 kb on - strand, within Dsui_0971 at 998.102 kb on + strand, within Dsui_0971 at 998.110 kb on - strand, within Dsui_0971 at 998.123 kb on - strand, within Dsui_0971 at 998.172 kb on - strand, within Dsui_0971 at 998.252 kb on - strand, within Dsui_0971 at 998.278 kb on + strand, within Dsui_0971 at 998.288 kb on + strand, within Dsui_0971 at 998.325 kb on - strand, within Dsui_0971 at 998.595 kb on - strand at 998.608 kb on + strand at 998.723 kb on - strand at 998.746 kb on - strand at 998.770 kb on - strand at 999.104 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.141 kb on - strand, within Dsui_0972 at 999.172 kb on + strand, within Dsui_0972 at 999.208 kb on - strand, within Dsui_0972 at 999.281 kb on + strand, within Dsui_0972 at 999.305 kb on + strand, within Dsui_0972 at 999.333 kb on - strand, within Dsui_0972 at 999.411 kb on - strand, within Dsui_0972 at 999.431 kb on + strand, within Dsui_0972 at 999.508 kb on - strand, within Dsui_0972 at 999.510 kb on + strand, within Dsui_0972 at 999.632 kb on - strand at 999.635 kb on + strand at 999.643 kb on - strand at 999.662 kb on + strand at 999.670 kb on - strand at 999.676 kb on - strand at 999.724 kb on + strand at 999.728 kb on + strand at 999.728 kb on + strand at 999.728 kb on + strand at 999.736 kb on - strand at 999.811 kb on + strand at 999.834 kb on - strand at 999.899 kb on + strand at 999.989 kb on + strand at 1000.006 kb on - strand, within Dsui_0973 at 1000.031 kb on - strand at 1000.046 kb on - strand, within Dsui_0973 at 1000.069 kb on + strand, within Dsui_0973 at 1000.119 kb on - strand, within Dsui_0973 at 1000.119 kb on - strand, within Dsui_0973 at 1000.172 kb on - strand, within Dsui_0973 at 1000.230 kb on - strand, within Dsui_0973 at 1000.308 kb on - strand, within Dsui_0973 at 1000.363 kb on + strand, within Dsui_0973 at 1000.383 kb on - strand at 1000.682 kb on + strand, within Dsui_0974
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.2 mM remove 997,821 - Dsui_0971 0.54 +0.1 997,862 + Dsui_0971 0.56 +0.7 997,862 + Dsui_0971 0.56 +0.7 997,902 + Dsui_0971 0.58 -1.3 997,944 - Dsui_0971 0.60 -0.3 997,949 - Dsui_0971 0.61 -0.4 998,020 - Dsui_0971 0.64 +0.2 998,102 + Dsui_0971 0.69 -1.3 998,110 - Dsui_0971 0.69 -0.1 998,123 - Dsui_0971 0.70 -0.4 998,172 - Dsui_0971 0.73 -0.7 998,252 - Dsui_0971 0.77 +0.8 998,278 + Dsui_0971 0.79 +0.7 998,288 + Dsui_0971 0.79 +0.7 998,325 - Dsui_0971 0.81 -1.0 998,595 - +1.1 998,608 + +0.7 998,723 - +0.2 998,746 - -0.4 998,770 - -0.4 999,104 - Dsui_0972 0.40 -0.2 999,141 - Dsui_0972 0.44 -0.3 999,141 - Dsui_0972 0.44 -0.9 999,172 + Dsui_0972 0.47 -0.3 999,208 - Dsui_0972 0.50 -1.1 999,281 + Dsui_0972 0.57 -1.3 999,305 + Dsui_0972 0.60 -1.3 999,333 - Dsui_0972 0.62 +0.4 999,411 - Dsui_0972 0.70 -0.5 999,431 + Dsui_0972 0.72 +0.7 999,508 - Dsui_0972 0.79 -0.0 999,510 + Dsui_0972 0.79 +0.7 999,632 - +0.7 999,635 + -0.9 999,643 - -2.1 999,662 + -0.3 999,670 - -2.1 999,676 - -1.9 999,724 + -0.3 999,728 + -0.3 999,728 + -1.6 999,728 + +0.7 999,736 - +0.1 999,811 + -2.1 999,834 - -1.9 999,899 + -0.3 999,989 + -0.5 1,000,006 - Dsui_0973 0.10 +0.7 1,000,031 - -0.3 1,000,046 - Dsui_0973 0.18 -1.3 1,000,069 + Dsui_0973 0.23 -1.4 1,000,119 - Dsui_0973 0.34 +0.7 1,000,119 - Dsui_0973 0.34 +0.7 1,000,172 - Dsui_0973 0.45 +0.7 1,000,230 - Dsui_0973 0.58 -0.3 1,000,308 - Dsui_0973 0.74 +0.7 1,000,363 + Dsui_0973 0.86 -0.4 1,000,383 - +0.7 1,000,682 + Dsui_0974 0.36 -2.5
Or see this region's nucleotide sequence