Experiment: ALP with Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0530 and Dsui_0531 overlap by 4 nucleotides Dsui_0531 and Dsui_0532 are separated by 58 nucleotides Dsui_0532 and Dsui_0533 are separated by 116 nucleotides
Dsui_0530: Dsui_0530 - ABC-type Fe3+-siderophore transport system, permease component, at 535,960 to 536,940
_0530
Dsui_0531: Dsui_0531 - ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component, at 536,937 to 537,707
_0531
Dsui_0532: Dsui_0532 - cob(I)alamin adenosyltransferase, at 537,766 to 538,368
_0532
Dsui_0533: Dsui_0533 - cobyrinic acid a,c-diamide synthase, at 538,485 to 539,792
_0533
Position (kb) 536
537
538 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 535.943 kb on + strand at 536.023 kb on - strand at 536.119 kb on + strand, within Dsui_0530 at 536.180 kb on - strand, within Dsui_0530 at 536.236 kb on - strand, within Dsui_0530 at 536.241 kb on - strand, within Dsui_0530 at 536.361 kb on + strand, within Dsui_0530 at 536.451 kb on - strand at 536.467 kb on + strand, within Dsui_0530 at 536.519 kb on - strand, within Dsui_0530 at 536.620 kb on + strand, within Dsui_0530 at 536.628 kb on - strand, within Dsui_0530 at 536.659 kb on - strand, within Dsui_0530 at 536.902 kb on + strand at 536.917 kb on + strand at 536.943 kb on + strand at 536.952 kb on - strand at 536.998 kb on - strand at 537.024 kb on + strand, within Dsui_0531 at 537.064 kb on + strand, within Dsui_0531 at 537.136 kb on + strand, within Dsui_0531 at 537.186 kb on + strand, within Dsui_0531 at 537.291 kb on + strand, within Dsui_0531 at 537.296 kb on + strand, within Dsui_0531 at 537.299 kb on - strand, within Dsui_0531 at 537.304 kb on - strand at 537.321 kb on + strand, within Dsui_0531 at 537.472 kb on + strand, within Dsui_0531 at 537.645 kb on + strand at 537.677 kb on - strand at 537.682 kb on - strand at 537.836 kb on - strand at 537.899 kb on - strand, within Dsui_0532 at 537.899 kb on - strand, within Dsui_0532 at 537.937 kb on - strand, within Dsui_0532 at 538.014 kb on + strand, within Dsui_0532 at 538.053 kb on - strand, within Dsui_0532 at 538.132 kb on - strand, within Dsui_0532 at 538.172 kb on - strand, within Dsui_0532 at 538.212 kb on - strand, within Dsui_0532 at 538.325 kb on + strand at 538.538 kb on + strand at 538.565 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.2 mM remove 535,943 + -0.8 536,023 - +0.6 536,119 + Dsui_0530 0.16 -0.8 536,180 - Dsui_0530 0.22 -0.4 536,236 - Dsui_0530 0.28 -2.4 536,241 - Dsui_0530 0.29 -1.0 536,361 + Dsui_0530 0.41 -0.5 536,451 - +0.6 536,467 + Dsui_0530 0.52 -0.2 536,519 - Dsui_0530 0.57 -1.0 536,620 + Dsui_0530 0.67 -0.6 536,628 - Dsui_0530 0.68 -1.0 536,659 - Dsui_0530 0.71 -1.0 536,902 + -0.5 536,917 + -0.7 536,943 + -0.4 536,952 - +0.6 536,998 - -1.0 537,024 + Dsui_0531 0.11 -0.7 537,064 + Dsui_0531 0.16 +0.2 537,136 + Dsui_0531 0.26 -0.9 537,186 + Dsui_0531 0.32 -0.5 537,291 + Dsui_0531 0.46 -0.5 537,296 + Dsui_0531 0.47 -0.3 537,299 - Dsui_0531 0.47 -2.0 537,304 - +0.6 537,321 + Dsui_0531 0.50 -0.7 537,472 + Dsui_0531 0.69 -0.8 537,645 + -0.3 537,677 - -2.6 537,682 - -0.4 537,836 - +0.6 537,899 - Dsui_0532 0.22 -2.4 537,899 - Dsui_0532 0.22 -1.4 537,937 - Dsui_0532 0.28 +0.6 538,014 + Dsui_0532 0.41 -1.0 538,053 - Dsui_0532 0.48 -2.9 538,132 - Dsui_0532 0.61 -0.4 538,172 - Dsui_0532 0.67 -0.4 538,212 - Dsui_0532 0.74 -0.4 538,325 + -1.7 538,538 + +0.6 538,565 + +0.6
Or see this region's nucleotide sequence