Experiment: ALP with Cobalt chloride 0.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0288 and Dsui_0289 are separated by 443 nucleotides Dsui_0289 and Dsui_0290 overlap by 4 nucleotides Dsui_0290 and Dsui_0291 are separated by 104 nucleotides
Dsui_0288: Dsui_0288 - hypothetical protein, at 287,380 to 287,595
_0288
Dsui_0289: Dsui_0289 - putative membrane protein, at 288,039 to 288,356
_0289
Dsui_0290: Dsui_0290 - SSS sodium solute transporter, at 288,353 to 290,101
_0290
Dsui_0291: Dsui_0291 - tellurite resistance protein-like permease, at 290,206 to 291,273
_0291
Position (kb) 288
289
290
291 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 287.469 kb on + strand, within Dsui_0288 at 287.479 kb on + strand, within Dsui_0288 at 287.487 kb on - strand, within Dsui_0288 at 287.506 kb on + strand, within Dsui_0288 at 287.531 kb on + strand, within Dsui_0288 at 287.539 kb on - strand, within Dsui_0288 at 287.563 kb on - strand, within Dsui_0288 at 287.565 kb on + strand, within Dsui_0288 at 287.565 kb on + strand, within Dsui_0288 at 287.565 kb on + strand, within Dsui_0288 at 287.575 kb on + strand at 287.584 kb on + strand at 287.699 kb on + strand at 287.744 kb on + strand at 287.744 kb on + strand at 287.747 kb on - strand at 288.046 kb on + strand at 288.047 kb on + strand at 288.051 kb on + strand at 288.051 kb on + strand at 288.059 kb on - strand at 288.099 kb on + strand, within Dsui_0289 at 288.204 kb on - strand, within Dsui_0289 at 288.243 kb on + strand, within Dsui_0289 at 288.323 kb on - strand, within Dsui_0289 at 288.333 kb on + strand at 288.379 kb on - strand at 288.386 kb on + strand at 288.387 kb on + strand at 288.392 kb on + strand at 288.395 kb on - strand at 288.395 kb on - strand at 288.449 kb on + strand at 288.502 kb on + strand at 288.555 kb on - strand, within Dsui_0290 at 288.555 kb on - strand, within Dsui_0290 at 288.668 kb on + strand, within Dsui_0290 at 288.676 kb on - strand, within Dsui_0290 at 288.799 kb on - strand, within Dsui_0290 at 288.816 kb on + strand, within Dsui_0290 at 288.816 kb on + strand, within Dsui_0290 at 288.837 kb on + strand, within Dsui_0290 at 288.882 kb on + strand, within Dsui_0290 at 288.893 kb on + strand, within Dsui_0290 at 288.941 kb on + strand, within Dsui_0290 at 288.947 kb on + strand at 288.968 kb on + strand, within Dsui_0290 at 289.028 kb on + strand, within Dsui_0290 at 289.028 kb on - strand, within Dsui_0290 at 289.055 kb on - strand, within Dsui_0290 at 289.078 kb on - strand, within Dsui_0290 at 289.155 kb on - strand, within Dsui_0290 at 289.157 kb on + strand, within Dsui_0290 at 289.183 kb on + strand, within Dsui_0290 at 289.189 kb on - strand, within Dsui_0290 at 289.197 kb on - strand, within Dsui_0290 at 289.256 kb on + strand, within Dsui_0290 at 289.264 kb on - strand, within Dsui_0290 at 289.289 kb on + strand, within Dsui_0290 at 289.292 kb on - strand, within Dsui_0290 at 289.568 kb on + strand, within Dsui_0290 at 289.568 kb on + strand, within Dsui_0290 at 289.577 kb on - strand, within Dsui_0290 at 289.606 kb on + strand, within Dsui_0290 at 289.614 kb on - strand, within Dsui_0290 at 289.622 kb on - strand, within Dsui_0290 at 289.632 kb on + strand, within Dsui_0290 at 289.677 kb on + strand, within Dsui_0290 at 289.685 kb on - strand, within Dsui_0290 at 289.685 kb on - strand, within Dsui_0290 at 289.708 kb on + strand, within Dsui_0290 at 289.737 kb on + strand, within Dsui_0290 at 289.756 kb on - strand, within Dsui_0290 at 289.798 kb on - strand, within Dsui_0290 at 289.870 kb on + strand, within Dsui_0290 at 289.870 kb on + strand, within Dsui_0290 at 289.878 kb on - strand, within Dsui_0290 at 289.878 kb on - strand, within Dsui_0290 at 289.878 kb on - strand, within Dsui_0290 at 290.125 kb on + strand at 290.133 kb on - strand at 290.224 kb on - strand at 290.229 kb on - strand at 290.247 kb on + strand at 290.252 kb on + strand at 290.260 kb on - strand at 290.307 kb on + strand at 290.317 kb on - strand, within Dsui_0291 at 290.325 kb on - strand, within Dsui_0291 at 290.339 kb on + strand, within Dsui_0291 at 290.368 kb on + strand, within Dsui_0291 at 290.411 kb on + strand, within Dsui_0291 at 290.449 kb on - strand, within Dsui_0291 at 290.498 kb on - strand, within Dsui_0291 at 290.604 kb on + strand, within Dsui_0291 at 290.671 kb on + strand at 290.755 kb on + strand, within Dsui_0291 at 290.841 kb on + strand, within Dsui_0291 at 290.963 kb on + strand, within Dsui_0291 at 291.024 kb on - strand, within Dsui_0291 at 291.024 kb on - strand, within Dsui_0291 at 291.090 kb on + strand at 291.090 kb on + strand at 291.098 kb on - strand, within Dsui_0291
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cobalt chloride 0.2 mM remove 287,469 + Dsui_0288 0.41 -0.3 287,479 + Dsui_0288 0.46 -0.2 287,487 - Dsui_0288 0.50 -0.9 287,506 + Dsui_0288 0.58 -0.1 287,531 + Dsui_0288 0.70 -0.4 287,539 - Dsui_0288 0.74 -1.9 287,563 - Dsui_0288 0.85 -1.3 287,565 + Dsui_0288 0.86 -0.2 287,565 + Dsui_0288 0.86 +0.0 287,565 + Dsui_0288 0.86 -0.3 287,575 + -0.1 287,584 + -0.5 287,699 + +0.2 287,744 + +0.7 287,744 + -1.9 287,747 - -0.7 288,046 + +1.0 288,047 + +0.7 288,051 + +0.2 288,051 + -0.3 288,059 - -0.9 288,099 + Dsui_0289 0.19 -0.5 288,204 - Dsui_0289 0.52 -0.3 288,243 + Dsui_0289 0.64 -1.6 288,323 - Dsui_0289 0.89 -0.3 288,333 + +0.8 288,379 - -0.3 288,386 + +0.5 288,387 + +1.2 288,392 + +0.6 288,395 - -0.3 288,395 - +0.7 288,449 + +0.4 288,502 + +0.1 288,555 - Dsui_0290 0.12 -0.9 288,555 - Dsui_0290 0.12 -0.3 288,668 + Dsui_0290 0.18 -0.1 288,676 - Dsui_0290 0.18 +0.7 288,799 - Dsui_0290 0.26 -0.9 288,816 + Dsui_0290 0.26 +0.5 288,816 + Dsui_0290 0.26 -0.6 288,837 + Dsui_0290 0.28 -0.8 288,882 + Dsui_0290 0.30 +0.9 288,893 + Dsui_0290 0.31 +0.1 288,941 + Dsui_0290 0.34 +0.4 288,947 + -0.3 288,968 + Dsui_0290 0.35 +1.3 289,028 + Dsui_0290 0.39 +0.6 289,028 - Dsui_0290 0.39 +0.7 289,055 - Dsui_0290 0.40 +0.7 289,078 - Dsui_0290 0.41 -0.9 289,155 - Dsui_0290 0.46 -1.6 289,157 + Dsui_0290 0.46 +0.8 289,183 + Dsui_0290 0.47 -0.0 289,189 - Dsui_0290 0.48 -0.3 289,197 - Dsui_0290 0.48 +0.7 289,256 + Dsui_0290 0.52 +0.3 289,264 - Dsui_0290 0.52 -0.3 289,289 + Dsui_0290 0.54 +0.3 289,292 - Dsui_0290 0.54 -2.5 289,568 + Dsui_0290 0.69 -0.1 289,568 + Dsui_0290 0.69 +0.1 289,577 - Dsui_0290 0.70 +0.7 289,606 + Dsui_0290 0.72 +0.6 289,614 - Dsui_0290 0.72 +0.5 289,622 - Dsui_0290 0.73 -1.3 289,632 + Dsui_0290 0.73 +1.0 289,677 + Dsui_0290 0.76 +0.2 289,685 - Dsui_0290 0.76 -3.2 289,685 - Dsui_0290 0.76 +0.7 289,708 + Dsui_0290 0.77 +1.0 289,737 + Dsui_0290 0.79 +1.5 289,756 - Dsui_0290 0.80 -1.3 289,798 - Dsui_0290 0.83 +0.7 289,870 + Dsui_0290 0.87 +0.4 289,870 + Dsui_0290 0.87 +0.9 289,878 - Dsui_0290 0.87 -1.6 289,878 - Dsui_0290 0.87 -0.9 289,878 - Dsui_0290 0.87 +0.7 290,125 + -0.3 290,133 - +0.7 290,224 - -0.9 290,229 - +0.7 290,247 + -0.3 290,252 + +0.7 290,260 - -0.3 290,307 + +0.7 290,317 - Dsui_0291 0.10 -1.3 290,325 - Dsui_0291 0.11 -0.9 290,339 + Dsui_0291 0.12 -1.9 290,368 + Dsui_0291 0.15 -0.9 290,411 + Dsui_0291 0.19 -0.9 290,449 - Dsui_0291 0.23 -0.3 290,498 - Dsui_0291 0.27 -0.3 290,604 + Dsui_0291 0.37 -0.9 290,671 + +0.7 290,755 + Dsui_0291 0.51 +0.7 290,841 + Dsui_0291 0.59 -0.3 290,963 + Dsui_0291 0.71 +0.7 291,024 - Dsui_0291 0.77 -1.3 291,024 - Dsui_0291 0.77 -0.3 291,090 + +0.7 291,090 + +0.7 291,098 - Dsui_0291 0.84 +0.7
Or see this region's nucleotide sequence