Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS23000 and BWI76_RS23005 are separated by 74 nucleotides BWI76_RS23005 and BWI76_RS23010 overlap by 7 nucleotides
BWI76_RS23000: BWI76_RS23000 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 4,798,846 to 4,799,901
_RS23000
BWI76_RS23005: BWI76_RS23005 - bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase, at 4,799,976 to 4,800,521
_RS23005
BWI76_RS23010: BWI76_RS23010 - cobyric acid synthase CobQ, at 4,800,515 to 4,802,038
_RS23010
Position (kb) 4799
4800
4801 Strain fitness (log2 ratio) -1
0
1
2 at 4799.001 kb on + strand, within BWI76_RS23000 at 4799.051 kb on - strand, within BWI76_RS23000 at 4799.933 kb on - strand at 4800.011 kb on + strand at 4800.013 kb on - strand at 4800.126 kb on - strand, within BWI76_RS23005 at 4800.368 kb on - strand, within BWI76_RS23005 at 4800.650 kb on + strand at 4800.697 kb on + strand, within BWI76_RS23010 at 4800.891 kb on + strand, within BWI76_RS23010 at 4800.920 kb on - strand, within BWI76_RS23010 at 4800.938 kb on - strand, within BWI76_RS23010 at 4801.437 kb on - strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.464 kb on + strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010 at 4801.472 kb on - strand, within BWI76_RS23010
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 4,799,001 + BWI76_RS23000 0.15 +0.1 4,799,051 - BWI76_RS23000 0.19 -0.6 4,799,933 - +1.4 4,800,011 + +0.3 4,800,013 - -0.4 4,800,126 - BWI76_RS23005 0.27 +0.8 4,800,368 - BWI76_RS23005 0.72 +0.4 4,800,650 + -0.6 4,800,697 + BWI76_RS23010 0.12 +0.9 4,800,891 + BWI76_RS23010 0.25 +2.4 4,800,920 - BWI76_RS23010 0.27 -0.6 4,800,938 - BWI76_RS23010 0.28 -0.5 4,801,437 - BWI76_RS23010 0.60 +0.2 4,801,464 + BWI76_RS23010 0.62 -0.2 4,801,464 + BWI76_RS23010 0.62 +0.2 4,801,472 - BWI76_RS23010 0.63 -0.5 4,801,472 - BWI76_RS23010 0.63 -0.9 4,801,472 - BWI76_RS23010 0.63 +0.7
Or see this region's nucleotide sequence