Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30605 and AZOBR_RS30610 are separated by 112 nucleotides AZOBR_RS30610 and AZOBR_RS30615 are separated by 98 nucleotides
AZOBR_RS30605: AZOBR_RS30605 - poly-beta-hydroxybutyrate polymerase, at 222,559 to 223,797
_RS30605
AZOBR_RS30610: AZOBR_RS30610 - acetyl-CoA acetyltransferase, at 223,910 to 225,085
_RS30610
AZOBR_RS30615: AZOBR_RS30615 - acetoacetyl-CoA reductase, at 225,184 to 225,906
_RS30615
Position (kb) 223
224
225
226 Strain fitness (log2 ratio) -2
-1
0
1
2 at 222.973 kb on + strand, within AZOBR_RS30605 at 222.973 kb on + strand, within AZOBR_RS30605 at 222.974 kb on - strand, within AZOBR_RS30605 at 222.974 kb on - strand, within AZOBR_RS30605 at 223.096 kb on + strand, within AZOBR_RS30605 at 223.097 kb on - strand, within AZOBR_RS30605 at 223.535 kb on - strand, within AZOBR_RS30605 at 223.642 kb on - strand, within AZOBR_RS30605 at 223.720 kb on - strand at 223.720 kb on - strand at 223.720 kb on - strand at 223.942 kb on + strand at 223.991 kb on + strand at 224.370 kb on - strand, within AZOBR_RS30610 at 224.993 kb on + strand at 224.994 kb on - strand at 224.994 kb on - strand at 225.126 kb on + strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.262 kb on + strand, within AZOBR_RS30615 at 225.263 kb on - strand, within AZOBR_RS30615 at 225.281 kb on - strand, within AZOBR_RS30615 at 225.337 kb on + strand, within AZOBR_RS30615 at 225.338 kb on - strand, within AZOBR_RS30615 at 225.608 kb on - strand at 225.622 kb on + strand, within AZOBR_RS30615 at 225.623 kb on - strand, within AZOBR_RS30615 at 225.718 kb on + strand at 225.718 kb on + strand, within AZOBR_RS30615 at 225.901 kb on + strand at 225.901 kb on + strand at 225.902 kb on - strand at 225.902 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 222,973 + AZOBR_RS30605 0.33 +2.3 222,973 + AZOBR_RS30605 0.33 -0.4 222,974 - AZOBR_RS30605 0.33 -1.1 222,974 - AZOBR_RS30605 0.33 -0.5 223,096 + AZOBR_RS30605 0.43 -0.4 223,097 - AZOBR_RS30605 0.43 -2.1 223,535 - AZOBR_RS30605 0.79 -1.1 223,642 - AZOBR_RS30605 0.87 -0.3 223,720 - -0.2 223,720 - -0.9 223,720 - -0.7 223,942 + -0.7 223,991 + -1.5 224,370 - AZOBR_RS30610 0.39 -0.8 224,993 + +0.7 224,994 - -0.5 224,994 - -1.3 225,126 + -1.1 225,127 - +0.5 225,127 - +0.5 225,127 - -2.4 225,262 + AZOBR_RS30615 0.11 -0.7 225,263 - AZOBR_RS30615 0.11 -0.6 225,281 - AZOBR_RS30615 0.13 -1.1 225,337 + AZOBR_RS30615 0.21 -1.7 225,338 - AZOBR_RS30615 0.21 -0.7 225,608 - +1.0 225,622 + AZOBR_RS30615 0.61 +0.2 225,623 - AZOBR_RS30615 0.61 +1.0 225,718 + -2.4 225,718 + AZOBR_RS30615 0.74 -0.7 225,901 + -0.1 225,901 + -0.7 225,902 - +0.1 225,902 - +0.3
Or see this region's nucleotide sequence