Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS14015

Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS14010 and AZOBR_RS14015 are separated by 71 nucleotidesAZOBR_RS14015 and AZOBR_RS14020 are separated by 683 nucleotides AZOBR_RS14010: AZOBR_RS14010 - homoserine O-succinyltransferase, at 2,941,170 to 2,942,093 _RS14010 AZOBR_RS14015: AZOBR_RS14015 - hypothetical protein, at 2,942,165 to 2,942,704 _RS14015 AZOBR_RS14020: AZOBR_RS14020 - methyl-accepting chemotaxis protein, at 2,943,388 to 2,945,067 _RS14020 Position (kb) 2942 2943Strain fitness (log2 ratio) -2 -1 0 1at 2941.421 kb on + strand, within AZOBR_RS14010at 2941.422 kb on - strand, within AZOBR_RS14010at 2941.422 kb on - strand, within AZOBR_RS14010at 2941.422 kb on - strand, within AZOBR_RS14010at 2941.434 kb on + strand, within AZOBR_RS14010at 2941.435 kb on - strand, within AZOBR_RS14010at 2941.435 kb on - strand, within AZOBR_RS14010at 2941.435 kb on - strand, within AZOBR_RS14010at 2941.527 kb on + strand, within AZOBR_RS14010at 2941.705 kb on - strand, within AZOBR_RS14010at 2941.705 kb on - strand, within AZOBR_RS14010at 2941.705 kb on - strand, within AZOBR_RS14010at 2941.881 kb on + strand, within AZOBR_RS14010at 2941.882 kb on - strand, within AZOBR_RS14010at 2941.908 kb on + strand, within AZOBR_RS14010at 2941.909 kb on - strandat 2941.956 kb on + strand, within AZOBR_RS14010at 2941.957 kb on - strand, within AZOBR_RS14010at 2941.957 kb on - strand, within AZOBR_RS14010at 2941.957 kb on - strand, within AZOBR_RS14010at 2942.046 kb on + strandat 2942.310 kb on + strand, within AZOBR_RS14015at 2942.310 kb on + strand, within AZOBR_RS14015at 2942.311 kb on - strand, within AZOBR_RS14015at 2942.598 kb on + strand, within AZOBR_RS14015at 2942.599 kb on - strand, within AZOBR_RS14015at 2942.828 kb on - strandat 2942.873 kb on - strandat 2943.021 kb on - strandat 2943.165 kb on - strandat 2943.686 kb on - strand, within AZOBR_RS14020

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days
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2,941,421 + AZOBR_RS14010 0.27 +1.2
2,941,422 - AZOBR_RS14010 0.27 -0.6
2,941,422 - AZOBR_RS14010 0.27 -1.6
2,941,422 - AZOBR_RS14010 0.27 -0.6
2,941,434 + AZOBR_RS14010 0.29 +0.1
2,941,435 - AZOBR_RS14010 0.29 +0.1
2,941,435 - AZOBR_RS14010 0.29 -0.3
2,941,435 - AZOBR_RS14010 0.29 +1.2
2,941,527 + AZOBR_RS14010 0.39 -0.4
2,941,705 - AZOBR_RS14010 0.58 -0.8
2,941,705 - AZOBR_RS14010 0.58 +0.1
2,941,705 - AZOBR_RS14010 0.58 -0.7
2,941,881 + AZOBR_RS14010 0.77 -0.4
2,941,882 - AZOBR_RS14010 0.77 -0.4
2,941,908 + AZOBR_RS14010 0.80 -1.1
2,941,909 - -1.4
2,941,956 + AZOBR_RS14010 0.85 +0.7
2,941,957 - AZOBR_RS14010 0.85 -0.4
2,941,957 - AZOBR_RS14010 0.85 +0.2
2,941,957 - AZOBR_RS14010 0.85 -0.2
2,942,046 + -1.6
2,942,310 + AZOBR_RS14015 0.27 +0.2
2,942,310 + AZOBR_RS14015 0.27 -0.6
2,942,311 - AZOBR_RS14015 0.27 -2.6
2,942,598 + AZOBR_RS14015 0.80 -0.1
2,942,599 - AZOBR_RS14015 0.80 -1.8
2,942,828 - -1.3
2,942,873 - +0.4
2,943,021 - +0.5
2,943,165 - -0.1
2,943,686 - AZOBR_RS14020 0.18 -0.1

Or see this region's nucleotide sequence