Experiment: L-Malic (C) with ammonium chloride; anaerobic; 3 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05265 and AZOBR_RS05270 are separated by 11 nucleotides AZOBR_RS05270 and AZOBR_RS05275 are separated by 213 nucleotides
AZOBR_RS05265: AZOBR_RS05265 - formate dehydrogenase, at 1,118,673 to 1,119,731
_RS05265
AZOBR_RS05270: AZOBR_RS05270 - exported protein of unknown function, at 1,119,743 to 1,120,132
_RS05270
AZOBR_RS05275: AZOBR_RS05275 - hypothetical protein, at 1,120,346 to 1,121,203
_RS05275
Position (kb) 1119
1120
1121 Strain fitness (log2 ratio) -1
0
1 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.878 kb on - strand, within AZOBR_RS05265 at 1118.878 kb on - strand, within AZOBR_RS05265 at 1118.967 kb on + strand, within AZOBR_RS05265 at 1118.967 kb on + strand, within AZOBR_RS05265 at 1118.968 kb on - strand, within AZOBR_RS05265 at 1118.968 kb on - strand, within AZOBR_RS05265 at 1119.237 kb on + strand, within AZOBR_RS05265 at 1119.237 kb on + strand, within AZOBR_RS05265 at 1119.238 kb on - strand, within AZOBR_RS05265 at 1119.561 kb on + strand, within AZOBR_RS05265 at 1119.561 kb on + strand, within AZOBR_RS05265 at 1119.562 kb on - strand, within AZOBR_RS05265 at 1119.562 kb on - strand, within AZOBR_RS05265 at 1119.873 kb on - strand, within AZOBR_RS05270 at 1119.873 kb on - strand, within AZOBR_RS05270 at 1119.929 kb on + strand, within AZOBR_RS05270 at 1120.074 kb on - strand, within AZOBR_RS05270 at 1120.147 kb on - strand at 1120.173 kb on - strand at 1120.424 kb on + strand at 1120.760 kb on + strand, within AZOBR_RS05275 at 1120.797 kb on - strand, within AZOBR_RS05275 at 1120.988 kb on - strand, within AZOBR_RS05275 at 1120.988 kb on - strand, within AZOBR_RS05275
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 3 days remove 1,118,877 + AZOBR_RS05265 0.19 +0.7 1,118,877 + AZOBR_RS05265 0.19 -0.7 1,118,877 + AZOBR_RS05265 0.19 -1.3 1,118,877 + AZOBR_RS05265 0.19 -1.3 1,118,877 + AZOBR_RS05265 0.19 -0.9 1,118,877 + AZOBR_RS05265 0.19 +0.6 1,118,878 - AZOBR_RS05265 0.19 -0.2 1,118,878 - AZOBR_RS05265 0.19 +0.1 1,118,967 + AZOBR_RS05265 0.28 -0.6 1,118,967 + AZOBR_RS05265 0.28 -0.9 1,118,968 - AZOBR_RS05265 0.28 -1.3 1,118,968 - AZOBR_RS05265 0.28 +0.5 1,119,237 + AZOBR_RS05265 0.53 -0.6 1,119,237 + AZOBR_RS05265 0.53 -0.1 1,119,238 - AZOBR_RS05265 0.53 -0.6 1,119,561 + AZOBR_RS05265 0.84 -0.4 1,119,561 + AZOBR_RS05265 0.84 -0.1 1,119,562 - AZOBR_RS05265 0.84 +0.3 1,119,562 - AZOBR_RS05265 0.84 +0.6 1,119,873 - AZOBR_RS05270 0.33 +1.2 1,119,873 - AZOBR_RS05270 0.33 +0.7 1,119,929 + AZOBR_RS05270 0.48 -0.4 1,120,074 - AZOBR_RS05270 0.85 +1.0 1,120,147 - +0.2 1,120,173 - +0.6 1,120,424 + -0.3 1,120,760 + AZOBR_RS05275 0.48 -1.3 1,120,797 - AZOBR_RS05275 0.53 -0.4 1,120,988 - AZOBR_RS05275 0.75 +0.4 1,120,988 - AZOBR_RS05275 0.75 -0.4
Or see this region's nucleotide sequence