Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23290 and AO353_23295 overlap by 4 nucleotides
AO353_23290: AO353_23290 - cystathionine beta-synthase, at 5,107,927 to 5,109,303
_23290
AO353_23295: AO353_23295 - cystathionine beta-lyase, at 5,109,300 to 5,110,478
_23295
Position (kb)
5109
5110
5111 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5108.309 kb on - strand, within AO353_23290 at 5108.312 kb on - strand, within AO353_23290 at 5108.573 kb on - strand, within AO353_23290 at 5108.678 kb on - strand, within AO353_23290 at 5108.760 kb on + strand, within AO353_23290 at 5108.760 kb on + strand, within AO353_23290 at 5108.761 kb on - strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.863 kb on + strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5108.864 kb on - strand, within AO353_23290 at 5109.085 kb on - strand, within AO353_23290 at 5109.123 kb on + strand, within AO353_23290 at 5109.124 kb on - strand, within AO353_23290 at 5109.124 kb on - strand, within AO353_23290 at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.297 kb on + strand at 5109.298 kb on - strand at 5109.298 kb on - strand at 5109.406 kb on - strand at 5109.406 kb on - strand at 5109.406 kb on - strand at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.420 kb on + strand, within AO353_23295 at 5109.442 kb on + strand, within AO353_23295 at 5109.443 kb on - strand, within AO353_23295 at 5109.460 kb on - strand, within AO353_23295 at 5109.621 kb on + strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.622 kb on - strand, within AO353_23295 at 5109.866 kb on - strand, within AO353_23295 at 5109.918 kb on + strand, within AO353_23295 at 5110.152 kb on + strand, within AO353_23295 at 5110.152 kb on + strand, within AO353_23295 at 5110.153 kb on - strand, within AO353_23295 at 5110.153 kb on - strand, within AO353_23295 at 5110.405 kb on + strand at 5110.405 kb on + strand at 5110.406 kb on - strand at 5110.539 kb on - strand at 5110.539 kb on - strand at 5110.539 kb on - strand at 5110.543 kb on + strand at 5110.544 kb on - strand at 5110.544 kb on - strand at 5110.544 kb on - strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.660 kb on + strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.661 kb on - strand at 5110.662 kb on + strand at 5110.662 kb on + strand at 5110.662 kb on + strand at 5110.662 kb on + strand at 5110.662 kb on + strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.663 kb on - strand at 5110.836 kb on - strand at 5110.954 kb on + strand at 5110.955 kb on - strand at 5111.032 kb on + strand at 5111.070 kb on + strand at 5111.070 kb on + strand at 5111.070 kb on + strand at 5111.070 kb on + strand at 5111.070 kb on + strand at 5111.070 kb on + strand at 5111.071 kb on - strand at 5111.071 kb on - strand at 5111.071 kb on - strand at 5111.071 kb on - strand at 5111.071 kb on - strand at 5111.071 kb on - strand at 5111.084 kb on + strand at 5111.084 kb on + strand at 5111.085 kb on - strand at 5111.085 kb on - strand at 5111.085 kb on - strand at 5111.251 kb on - strand at 5111.443 kb on + strand at 5111.444 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 5,108,309 - AO353_23290 0.28 +0.5 5,108,312 - AO353_23290 0.28 +2.5 5,108,573 - AO353_23290 0.47 +0.1 5,108,678 - AO353_23290 0.55 -0.1 5,108,760 + AO353_23290 0.60 -1.0 5,108,760 + AO353_23290 0.60 -0.0 5,108,761 - AO353_23290 0.61 -0.9 5,108,863 + AO353_23290 0.68 -1.1 5,108,863 + AO353_23290 0.68 -1.2 5,108,863 + AO353_23290 0.68 -0.2 5,108,863 + AO353_23290 0.68 +0.2 5,108,863 + AO353_23290 0.68 -0.8 5,108,864 - AO353_23290 0.68 -0.1 5,108,864 - AO353_23290 0.68 +0.5 5,108,864 - AO353_23290 0.68 +1.2 5,109,085 - AO353_23290 0.84 +1.5 5,109,123 + AO353_23290 0.87 -2.2 5,109,124 - AO353_23290 0.87 -0.4 5,109,124 - AO353_23290 0.87 -0.5 5,109,297 + -0.6 5,109,297 + -0.7 5,109,297 + -0.8 5,109,297 + -0.0 5,109,297 + +0.8 5,109,298 - -0.2 5,109,298 - -1.5 5,109,406 - +0.8 5,109,406 - -1.1 5,109,406 - -0.1 5,109,420 + AO353_23295 0.10 -2.3 5,109,420 + AO353_23295 0.10 +1.4 5,109,420 + AO353_23295 0.10 -1.8 5,109,420 + AO353_23295 0.10 +1.9 5,109,442 + AO353_23295 0.12 -1.5 5,109,443 - AO353_23295 0.12 -1.2 5,109,460 - AO353_23295 0.14 -2.0 5,109,621 + AO353_23295 0.27 -0.4 5,109,622 - AO353_23295 0.27 -2.4 5,109,622 - AO353_23295 0.27 +0.7 5,109,622 - AO353_23295 0.27 -1.9 5,109,866 - AO353_23295 0.48 -0.2 5,109,918 + AO353_23295 0.52 +0.8 5,110,152 + AO353_23295 0.72 -0.3 5,110,152 + AO353_23295 0.72 -2.1 5,110,153 - AO353_23295 0.72 -0.7 5,110,153 - AO353_23295 0.72 +2.5 5,110,405 + -0.3 5,110,405 + +0.4 5,110,406 - +0.5 5,110,539 - -0.1 5,110,539 - +0.4 5,110,539 - +1.1 5,110,543 + -0.3 5,110,544 - -0.5 5,110,544 - +0.5 5,110,544 - -0.8 5,110,660 + -0.3 5,110,660 + +0.5 5,110,660 + -1.5 5,110,660 + -0.8 5,110,660 + +0.2 5,110,660 + -0.2 5,110,660 + -1.2 5,110,660 + +0.6 5,110,660 + -1.7 5,110,660 + +0.5 5,110,660 + -1.2 5,110,660 + -1.6 5,110,661 - -0.9 5,110,661 - -1.1 5,110,661 - -2.1 5,110,661 - +0.0 5,110,661 - +1.5 5,110,661 - -0.3 5,110,661 - -1.4 5,110,661 - +0.2 5,110,661 - -0.4 5,110,662 + -1.6 5,110,662 + +3.5 5,110,662 + -0.3 5,110,662 + -1.1 5,110,662 + -0.1 5,110,663 - -0.3 5,110,663 - -0.6 5,110,663 - +2.7 5,110,663 - -0.7 5,110,663 - -1.3 5,110,663 - -1.2 5,110,663 - +0.1 5,110,663 - +1.3 5,110,663 - +0.9 5,110,663 - -0.4 5,110,836 - -1.2 5,110,954 + +1.2 5,110,955 - +0.6 5,111,032 + -1.1 5,111,070 + -0.8 5,111,070 + +0.9 5,111,070 + -1.0 5,111,070 + -1.5 5,111,070 + -1.1 5,111,070 + -0.8 5,111,071 - +1.0 5,111,071 - -1.4 5,111,071 - -0.7 5,111,071 - +0.9 5,111,071 - -0.5 5,111,071 - +0.9 5,111,084 + +0.2 5,111,084 + +0.0 5,111,085 - -0.6 5,111,085 - -0.4 5,111,085 - +0.0 5,111,251 - -0.8 5,111,443 + -1.0 5,111,444 - -1.2
Or see this region's nucleotide sequence