Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22000 and AO353_22005 are separated by 220 nucleotides AO353_22005 and AO353_22010 are separated by 41 nucleotides AO353_22010 and AO353_22015 are separated by 339 nucleotides
AO353_22000: AO353_22000 - nitric oxide reductase activation protein NorD, at 4,818,476 to 4,820,317
_22000
AO353_22005: AO353_22005 - transcription factor, at 4,820,538 to 4,821,221
_22005
AO353_22010: AO353_22010 - hypothetical protein, at 4,821,263 to 4,821,478
_22010
AO353_22015: AO353_22015 - short-chain dehydrogenase, at 4,821,818 to 4,823,008
_22015
Position (kb)
4821
4822 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4820.295 kb on - strand at 4820.377 kb on + strand at 4820.378 kb on - strand at 4820.516 kb on + strand at 4820.516 kb on + strand at 4820.516 kb on + strand at 4820.710 kb on - strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.875 kb on + strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.876 kb on - strand, within AO353_22005 at 4820.931 kb on + strand, within AO353_22005 at 4820.931 kb on + strand, within AO353_22005 at 4820.931 kb on + strand, within AO353_22005 at 4820.931 kb on + strand, within AO353_22005 at 4820.932 kb on - strand at 4820.932 kb on - strand, within AO353_22005 at 4820.932 kb on - strand, within AO353_22005 at 4820.932 kb on - strand, within AO353_22005 at 4820.932 kb on - strand, within AO353_22005 at 4820.932 kb on - strand, within AO353_22005 at 4820.932 kb on - strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.935 kb on + strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4820.936 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.055 kb on - strand, within AO353_22005 at 4821.131 kb on + strand, within AO353_22005 at 4821.132 kb on - strand, within AO353_22005 at 4821.132 kb on - strand, within AO353_22005 at 4821.389 kb on + strand, within AO353_22010 at 4821.389 kb on + strand, within AO353_22010 at 4821.390 kb on - strand, within AO353_22010 at 4821.390 kb on - strand, within AO353_22010 at 4821.390 kb on - strand, within AO353_22010 at 4821.390 kb on - strand, within AO353_22010 at 4821.391 kb on + strand, within AO353_22010 at 4821.391 kb on + strand, within AO353_22010 at 4821.392 kb on - strand, within AO353_22010 at 4821.392 kb on - strand at 4821.392 kb on - strand, within AO353_22010 at 4821.442 kb on + strand, within AO353_22010 at 4821.443 kb on - strand, within AO353_22010 at 4821.466 kb on + strand at 4821.479 kb on + strand at 4821.479 kb on + strand at 4821.480 kb on - strand at 4821.480 kb on - strand at 4821.484 kb on + strand at 4821.485 kb on - strand at 4821.493 kb on - strand at 4821.493 kb on - strand at 4821.493 kb on - strand at 4821.503 kb on + strand at 4821.503 kb on + strand at 4821.503 kb on + strand at 4821.504 kb on - strand at 4821.504 kb on - strand at 4821.504 kb on - strand at 4821.578 kb on + strand at 4821.578 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.598 kb on + strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.599 kb on - strand at 4821.600 kb on + strand at 4821.600 kb on + strand at 4821.600 kb on + strand at 4821.600 kb on + strand at 4821.600 kb on + strand at 4821.601 kb on - strand at 4821.601 kb on - strand at 4821.601 kb on - strand at 4821.601 kb on - strand at 4821.601 kb on - strand at 4821.601 kb on - strand at 4821.739 kb on + strand at 4821.818 kb on - strand at 4821.818 kb on - strand at 4821.818 kb on - strand at 4821.818 kb on - strand at 4821.839 kb on - strand at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.246 kb on + strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.247 kb on - strand, within AO353_22015 at 4822.250 kb on + strand, within AO353_22015 at 4822.304 kb on + strand, within AO353_22015
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 4,820,295 - -1.1 4,820,377 + -0.7 4,820,378 - -0.5 4,820,516 + +0.6 4,820,516 + -1.1 4,820,516 + -0.2 4,820,710 - AO353_22005 0.25 +0.0 4,820,875 + AO353_22005 0.49 -0.2 4,820,875 + AO353_22005 0.49 +0.2 4,820,875 + AO353_22005 0.49 +1.0 4,820,875 + AO353_22005 0.49 +2.6 4,820,875 + AO353_22005 0.49 -0.2 4,820,875 + AO353_22005 0.49 -0.7 4,820,876 - AO353_22005 0.49 -0.4 4,820,876 - AO353_22005 0.49 -0.3 4,820,876 - AO353_22005 0.49 +0.3 4,820,876 - AO353_22005 0.49 -2.1 4,820,876 - AO353_22005 0.49 -0.7 4,820,876 - AO353_22005 0.49 -1.0 4,820,876 - AO353_22005 0.49 +2.6 4,820,876 - AO353_22005 0.49 +1.0 4,820,931 + AO353_22005 0.57 +0.6 4,820,931 + AO353_22005 0.57 -2.4 4,820,931 + AO353_22005 0.57 -2.3 4,820,931 + AO353_22005 0.57 +1.8 4,820,932 - +1.0 4,820,932 - AO353_22005 0.58 -1.2 4,820,932 - AO353_22005 0.58 +2.6 4,820,932 - AO353_22005 0.58 -0.6 4,820,932 - AO353_22005 0.58 -1.8 4,820,932 - AO353_22005 0.58 -0.4 4,820,932 - AO353_22005 0.58 -0.5 4,820,935 + AO353_22005 0.58 -1.8 4,820,935 + AO353_22005 0.58 -1.1 4,820,935 + AO353_22005 0.58 -0.7 4,820,935 + AO353_22005 0.58 +0.2 4,820,935 + AO353_22005 0.58 -1.3 4,820,935 + AO353_22005 0.58 +0.5 4,820,935 + AO353_22005 0.58 -1.8 4,820,935 + AO353_22005 0.58 +0.0 4,820,935 + AO353_22005 0.58 +0.7 4,820,935 + AO353_22005 0.58 -1.3 4,820,936 - AO353_22005 0.58 -1.4 4,820,936 - AO353_22005 0.58 +0.0 4,820,936 - AO353_22005 0.58 -2.2 4,820,936 - AO353_22005 0.58 +1.0 4,820,936 - AO353_22005 0.58 -1.8 4,820,936 - AO353_22005 0.58 +2.2 4,820,936 - AO353_22005 0.58 +1.0 4,820,936 - AO353_22005 0.58 -1.0 4,820,936 - AO353_22005 0.58 +1.5 4,821,055 - AO353_22005 0.76 -0.4 4,821,055 - AO353_22005 0.76 +0.6 4,821,055 - AO353_22005 0.76 -0.2 4,821,055 - AO353_22005 0.76 -0.3 4,821,055 - AO353_22005 0.76 -0.4 4,821,055 - AO353_22005 0.76 +1.6 4,821,055 - AO353_22005 0.76 -1.0 4,821,131 + AO353_22005 0.87 -0.8 4,821,132 - AO353_22005 0.87 +0.8 4,821,132 - AO353_22005 0.87 +0.5 4,821,389 + AO353_22010 0.58 -0.6 4,821,389 + AO353_22010 0.58 -1.4 4,821,390 - AO353_22010 0.59 -0.2 4,821,390 - AO353_22010 0.59 -0.9 4,821,390 - AO353_22010 0.59 +1.3 4,821,390 - AO353_22010 0.59 -0.3 4,821,391 + AO353_22010 0.59 -0.4 4,821,391 + AO353_22010 0.59 -0.8 4,821,392 - AO353_22010 0.60 -0.9 4,821,392 - +0.8 4,821,392 - AO353_22010 0.60 -0.4 4,821,442 + AO353_22010 0.83 -0.3 4,821,443 - AO353_22010 0.83 -0.4 4,821,466 + -0.5 4,821,479 + -0.8 4,821,479 + -1.2 4,821,480 - +0.5 4,821,480 - -1.1 4,821,484 + -1.5 4,821,485 - +0.6 4,821,493 - -1.2 4,821,493 - +1.9 4,821,493 - -1.5 4,821,503 + -1.1 4,821,503 + +1.6 4,821,503 + +2.0 4,821,504 - +0.4 4,821,504 - -2.6 4,821,504 - -0.7 4,821,578 + -1.8 4,821,578 + -0.5 4,821,598 + +0.0 4,821,598 + +0.2 4,821,598 + -1.7 4,821,598 + -3.0 4,821,598 + +1.0 4,821,598 + -0.8 4,821,598 + +1.6 4,821,598 + +0.0 4,821,598 + -0.4 4,821,599 - -1.0 4,821,599 - -0.3 4,821,599 - +1.0 4,821,599 - -0.8 4,821,599 - -0.5 4,821,599 - -0.3 4,821,599 - -0.7 4,821,599 - +0.6 4,821,599 - -1.0 4,821,599 - -1.9 4,821,600 + +1.0 4,821,600 + -0.5 4,821,600 + -0.5 4,821,600 + -2.9 4,821,600 + +1.4 4,821,601 - -0.2 4,821,601 - -0.4 4,821,601 - -0.8 4,821,601 - -0.7 4,821,601 - -1.7 4,821,601 - -0.3 4,821,739 + -0.3 4,821,818 - -0.2 4,821,818 - -0.4 4,821,818 - -0.1 4,821,818 - +0.5 4,821,839 - +0.0 4,822,246 + AO353_22015 0.36 +1.4 4,822,246 + AO353_22015 0.36 +0.1 4,822,246 + AO353_22015 0.36 +0.2 4,822,246 + AO353_22015 0.36 -0.4 4,822,246 + AO353_22015 0.36 +0.4 4,822,246 + AO353_22015 0.36 -1.7 4,822,246 + AO353_22015 0.36 +0.6 4,822,246 + AO353_22015 0.36 +1.2 4,822,246 + AO353_22015 0.36 +0.5 4,822,247 - AO353_22015 0.36 +0.9 4,822,247 - AO353_22015 0.36 -0.3 4,822,247 - AO353_22015 0.36 -0.9 4,822,247 - AO353_22015 0.36 -0.1 4,822,247 - AO353_22015 0.36 -0.8 4,822,247 - AO353_22015 0.36 +0.0 4,822,250 + AO353_22015 0.36 +0.2 4,822,304 + AO353_22015 0.41 -0.3
Or see this region's nucleotide sequence