Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16275 and AO353_16280 overlap by 4 nucleotides AO353_16280 and AO353_16285 overlap by 1 nucleotides AO353_16285 and AO353_16290 are separated by 191 nucleotides
AO353_16275: AO353_16275 - ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, ATPase component (from data) , at 3,614,409 to 3,615,143
_16275
AO353_16280: AO353_16280 - ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 1 (from data) , at 3,615,140 to 3,615,811
_16280
AO353_16285: AO353_16285 - ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, permease component 2 (from data) , at 3,615,811 to 3,616,557
_16285
AO353_16290: AO353_16290 - ABC transporter for L-aspartate, L-asparagine, L-glutamate, and L-glutamine, periplasmic substrate-binding component (from data) , at 3,616,749 to 3,617,663
_16290
Position (kb)
3615
3616
3617 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3615.096 kb on + strand at 3615.096 kb on + strand at 3615.097 kb on - strand at 3615.113 kb on - strand at 3615.135 kb on - strand at 3615.143 kb on + strand at 3615.143 kb on + strand at 3615.144 kb on - strand at 3615.204 kb on + strand at 3615.204 kb on + strand at 3615.204 kb on + strand at 3615.205 kb on - strand at 3615.205 kb on - strand at 3615.205 kb on - strand at 3615.205 kb on - strand at 3615.205 kb on - strand at 3615.268 kb on + strand, within AO353_16280 at 3615.300 kb on + strand, within AO353_16280 at 3615.300 kb on + strand, within AO353_16280 at 3615.300 kb on + strand, within AO353_16280 at 3615.301 kb on - strand, within AO353_16280 at 3615.313 kb on + strand, within AO353_16280 at 3615.314 kb on - strand, within AO353_16280 at 3615.314 kb on - strand, within AO353_16280 at 3615.314 kb on - strand, within AO353_16280 at 3615.314 kb on - strand, within AO353_16280 at 3615.314 kb on - strand, within AO353_16280 at 3615.486 kb on + strand, within AO353_16280 at 3615.588 kb on + strand, within AO353_16280 at 3615.588 kb on + strand, within AO353_16280 at 3615.588 kb on + strand, within AO353_16280 at 3615.588 kb on + strand, within AO353_16280 at 3615.589 kb on - strand, within AO353_16280 at 3615.589 kb on - strand, within AO353_16280 at 3615.630 kb on + strand, within AO353_16280 at 3615.630 kb on + strand, within AO353_16280 at 3615.630 kb on + strand, within AO353_16280 at 3615.630 kb on + strand, within AO353_16280 at 3615.631 kb on - strand, within AO353_16280 at 3615.631 kb on - strand, within AO353_16280 at 3615.631 kb on - strand, within AO353_16280 at 3615.631 kb on - strand, within AO353_16280 at 3615.639 kb on + strand, within AO353_16280 at 3615.639 kb on + strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.640 kb on - strand, within AO353_16280 at 3615.785 kb on + strand at 3615.786 kb on - strand at 3615.812 kb on + strand at 3615.812 kb on + strand at 3615.812 kb on + strand at 3615.812 kb on + strand at 3615.813 kb on - strand at 3615.813 kb on - strand at 3615.813 kb on - strand at 3615.813 kb on - strand at 3615.813 kb on - strand at 3615.813 kb on - strand at 3615.816 kb on + strand at 3615.816 kb on + strand at 3615.817 kb on - strand at 3615.817 kb on - strand at 3615.817 kb on - strand at 3615.864 kb on + strand at 3615.864 kb on + strand at 3615.864 kb on + strand at 3615.864 kb on + strand at 3615.865 kb on - strand at 3615.865 kb on - strand at 3615.865 kb on - strand at 3615.865 kb on - strand at 3615.865 kb on - strand at 3615.865 kb on - strand at 3615.902 kb on + strand, within AO353_16285 at 3615.902 kb on + strand, within AO353_16285 at 3615.902 kb on + strand, within AO353_16285 at 3615.902 kb on + strand, within AO353_16285 at 3615.902 kb on + strand, within AO353_16285 at 3615.902 kb on + strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3615.903 kb on - strand, within AO353_16285 at 3616.041 kb on + strand, within AO353_16285 at 3616.042 kb on - strand, within AO353_16285 at 3616.092 kb on - strand, within AO353_16285 at 3616.226 kb on + strand, within AO353_16285 at 3616.259 kb on + strand, within AO353_16285 at 3616.259 kb on + strand, within AO353_16285 at 3616.259 kb on + strand, within AO353_16285 at 3616.304 kb on + strand, within AO353_16285 at 3616.304 kb on + strand, within AO353_16285 at 3616.304 kb on + strand, within AO353_16285 at 3616.305 kb on - strand, within AO353_16285 at 3616.333 kb on + strand, within AO353_16285 at 3616.333 kb on + strand, within AO353_16285 at 3616.333 kb on + strand, within AO353_16285 at 3616.334 kb on - strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.355 kb on + strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.356 kb on - strand, within AO353_16285 at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.496 kb on + strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.497 kb on - strand at 3616.550 kb on + strand at 3616.550 kb on + strand at 3616.550 kb on + strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.551 kb on - strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.585 kb on + strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.586 kb on - strand at 3616.693 kb on + strand at 3616.873 kb on + strand, within AO353_16290 at 3616.873 kb on + strand, within AO353_16290 at 3616.873 kb on + strand, within AO353_16290 at 3616.874 kb on - strand, within AO353_16290 at 3616.874 kb on - strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.877 kb on + strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.878 kb on - strand, within AO353_16290 at 3616.900 kb on + strand, within AO353_16290 at 3616.900 kb on + strand, within AO353_16290 at 3616.900 kb on + strand, within AO353_16290 at 3616.900 kb on + strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.901 kb on - strand, within AO353_16290 at 3616.923 kb on + strand, within AO353_16290 at 3616.924 kb on - strand, within AO353_16290 at 3616.978 kb on + strand, within AO353_16290 at 3616.978 kb on + strand, within AO353_16290 at 3616.978 kb on + strand, within AO353_16290 at 3616.978 kb on + strand, within AO353_16290 at 3616.978 kb on + strand, within AO353_16290 at 3616.979 kb on - strand, within AO353_16290 at 3617.236 kb on + strand, within AO353_16290 at 3617.236 kb on + strand, within AO353_16290 at 3617.236 kb on + strand, within AO353_16290 at 3617.236 kb on + strand, within AO353_16290 at 3617.236 kb on + strand, within AO353_16290 at 3617.237 kb on - strand, within AO353_16290 at 3617.237 kb on - strand, within AO353_16290 at 3617.237 kb on - strand, within AO353_16290 at 3617.349 kb on + strand, within AO353_16290 at 3617.349 kb on + strand, within AO353_16290 at 3617.349 kb on + strand, within AO353_16290 at 3617.349 kb on + strand, within AO353_16290 at 3617.350 kb on - strand, within AO353_16290 at 3617.350 kb on - strand, within AO353_16290 at 3617.350 kb on - strand, within AO353_16290 at 3617.350 kb on - strand, within AO353_16290 at 3617.350 kb on - strand, within AO353_16290 at 3617.376 kb on - strand, within AO353_16290 at 3617.401 kb on + strand, within AO353_16290 at 3617.401 kb on + strand, within AO353_16290 at 3617.401 kb on + strand, within AO353_16290 at 3617.402 kb on - strand, within AO353_16290 at 3617.402 kb on - strand, within AO353_16290 at 3617.402 kb on - strand, within AO353_16290 at 3617.509 kb on + strand, within AO353_16290 at 3617.509 kb on + strand, within AO353_16290 at 3617.510 kb on - strand, within AO353_16290 at 3617.510 kb on - strand, within AO353_16290 at 3617.522 kb on + strand, within AO353_16290 at 3617.522 kb on + strand, within AO353_16290 at 3617.522 kb on + strand, within AO353_16290 at 3617.523 kb on - strand, within AO353_16290 at 3617.523 kb on - strand, within AO353_16290 at 3617.523 kb on - strand, within AO353_16290
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 3,615,096 + -0.6 3,615,096 + +0.0 3,615,097 - +0.2 3,615,113 - -0.1 3,615,135 - -0.3 3,615,143 + -0.2 3,615,143 + -2.6 3,615,144 - -0.5 3,615,204 + +1.0 3,615,204 + -0.9 3,615,204 + -0.8 3,615,205 - -1.2 3,615,205 - -0.1 3,615,205 - -1.9 3,615,205 - +0.1 3,615,205 - +0.7 3,615,268 + AO353_16280 0.19 -0.6 3,615,300 + AO353_16280 0.24 -0.8 3,615,300 + AO353_16280 0.24 -0.8 3,615,300 + AO353_16280 0.24 -0.2 3,615,301 - AO353_16280 0.24 -1.0 3,615,313 + AO353_16280 0.26 +1.3 3,615,314 - AO353_16280 0.26 +0.4 3,615,314 - AO353_16280 0.26 +0.3 3,615,314 - AO353_16280 0.26 +1.4 3,615,314 - AO353_16280 0.26 -0.8 3,615,314 - AO353_16280 0.26 -1.2 3,615,486 + AO353_16280 0.51 -1.1 3,615,588 + AO353_16280 0.67 +0.2 3,615,588 + AO353_16280 0.67 +0.1 3,615,588 + AO353_16280 0.67 +0.8 3,615,588 + AO353_16280 0.67 -0.7 3,615,589 - AO353_16280 0.67 -1.3 3,615,589 - AO353_16280 0.67 +0.8 3,615,630 + AO353_16280 0.73 -0.8 3,615,630 + AO353_16280 0.73 -0.2 3,615,630 + AO353_16280 0.73 +1.2 3,615,630 + AO353_16280 0.73 -0.1 3,615,631 - AO353_16280 0.73 -0.1 3,615,631 - AO353_16280 0.73 +1.5 3,615,631 - AO353_16280 0.73 -0.5 3,615,631 - AO353_16280 0.73 -1.5 3,615,639 + AO353_16280 0.74 +0.4 3,615,639 + AO353_16280 0.74 -1.1 3,615,640 - AO353_16280 0.74 -1.2 3,615,640 - AO353_16280 0.74 +0.8 3,615,640 - AO353_16280 0.74 -0.7 3,615,640 - AO353_16280 0.74 -1.4 3,615,640 - AO353_16280 0.74 -0.8 3,615,640 - AO353_16280 0.74 -1.1 3,615,640 - AO353_16280 0.74 +0.8 3,615,785 + -2.5 3,615,786 - +0.5 3,615,812 + +1.5 3,615,812 + -1.2 3,615,812 + -0.6 3,615,812 + -0.3 3,615,813 - +0.3 3,615,813 - +0.5 3,615,813 - -2.5 3,615,813 - +1.0 3,615,813 - -0.6 3,615,813 - +0.1 3,615,816 + -1.0 3,615,816 + +1.8 3,615,817 - -0.8 3,615,817 - +0.5 3,615,817 - +0.4 3,615,864 + +0.9 3,615,864 + -0.8 3,615,864 + -2.2 3,615,864 + +0.1 3,615,865 - -0.2 3,615,865 - -0.8 3,615,865 - -1.4 3,615,865 - +0.8 3,615,865 - -0.3 3,615,865 - +0.6 3,615,902 + AO353_16285 0.12 -1.1 3,615,902 + AO353_16285 0.12 -0.3 3,615,902 + AO353_16285 0.12 -1.4 3,615,902 + AO353_16285 0.12 -1.9 3,615,902 + AO353_16285 0.12 -0.1 3,615,902 + AO353_16285 0.12 -1.6 3,615,903 - AO353_16285 0.12 -0.0 3,615,903 - AO353_16285 0.12 -1.1 3,615,903 - AO353_16285 0.12 -1.0 3,615,903 - AO353_16285 0.12 +1.7 3,615,903 - AO353_16285 0.12 +0.5 3,615,903 - AO353_16285 0.12 +0.4 3,616,041 + AO353_16285 0.31 -2.3 3,616,042 - AO353_16285 0.31 -0.4 3,616,092 - AO353_16285 0.38 -1.6 3,616,226 + AO353_16285 0.56 +0.1 3,616,259 + AO353_16285 0.60 +0.1 3,616,259 + AO353_16285 0.60 +0.9 3,616,259 + AO353_16285 0.60 -0.3 3,616,304 + AO353_16285 0.66 -0.1 3,616,304 + AO353_16285 0.66 -1.5 3,616,304 + AO353_16285 0.66 +1.2 3,616,305 - AO353_16285 0.66 -0.1 3,616,333 + AO353_16285 0.70 -0.7 3,616,333 + AO353_16285 0.70 -1.6 3,616,333 + AO353_16285 0.70 -0.9 3,616,334 - AO353_16285 0.70 -0.2 3,616,355 + AO353_16285 0.73 -1.4 3,616,355 + AO353_16285 0.73 -0.2 3,616,355 + AO353_16285 0.73 +0.1 3,616,355 + AO353_16285 0.73 -0.4 3,616,355 + AO353_16285 0.73 -0.4 3,616,355 + AO353_16285 0.73 -0.2 3,616,355 + AO353_16285 0.73 -0.5 3,616,355 + AO353_16285 0.73 -0.5 3,616,355 + AO353_16285 0.73 -0.8 3,616,355 + AO353_16285 0.73 +1.0 3,616,355 + AO353_16285 0.73 -1.6 3,616,355 + AO353_16285 0.73 -1.8 3,616,356 - AO353_16285 0.73 +0.0 3,616,356 - AO353_16285 0.73 -0.8 3,616,356 - AO353_16285 0.73 -1.4 3,616,356 - AO353_16285 0.73 +0.2 3,616,356 - AO353_16285 0.73 -0.0 3,616,356 - AO353_16285 0.73 -0.8 3,616,356 - AO353_16285 0.73 -0.8 3,616,356 - AO353_16285 0.73 -0.5 3,616,356 - AO353_16285 0.73 +0.3 3,616,496 + +0.5 3,616,496 + -0.2 3,616,496 + -0.4 3,616,496 + -0.4 3,616,496 + -1.9 3,616,496 + -0.3 3,616,496 + -0.1 3,616,497 - +0.1 3,616,497 - -0.5 3,616,497 - +0.5 3,616,497 - +0.5 3,616,497 - +1.2 3,616,497 - -0.8 3,616,497 - +0.7 3,616,550 + -0.3 3,616,550 + +0.1 3,616,550 + +0.1 3,616,551 - -1.6 3,616,551 - +0.8 3,616,551 - +2.3 3,616,551 - -0.4 3,616,551 - +1.1 3,616,551 - +0.3 3,616,551 - -1.9 3,616,551 - -0.8 3,616,585 + -2.2 3,616,585 + -1.2 3,616,585 + -1.3 3,616,585 + +0.6 3,616,585 + -1.9 3,616,585 + -1.4 3,616,585 + -0.4 3,616,585 + -1.7 3,616,585 + +0.3 3,616,585 + +0.6 3,616,585 + -0.6 3,616,586 - -0.4 3,616,586 - -0.8 3,616,586 - -1.3 3,616,586 - +0.5 3,616,586 - -0.2 3,616,586 - +0.7 3,616,586 - -1.5 3,616,586 - -0.2 3,616,586 - -0.7 3,616,586 - +0.8 3,616,693 + +1.2 3,616,873 + AO353_16290 0.14 -2.0 3,616,873 + AO353_16290 0.14 -0.5 3,616,873 + AO353_16290 0.14 +0.7 3,616,874 - AO353_16290 0.14 -2.0 3,616,874 - AO353_16290 0.14 -0.0 3,616,877 + AO353_16290 0.14 +0.5 3,616,877 + AO353_16290 0.14 -1.2 3,616,877 + AO353_16290 0.14 +1.5 3,616,877 + AO353_16290 0.14 -0.1 3,616,877 + AO353_16290 0.14 -0.8 3,616,877 + AO353_16290 0.14 -0.1 3,616,877 + AO353_16290 0.14 -1.2 3,616,877 + AO353_16290 0.14 +0.8 3,616,877 + AO353_16290 0.14 -0.5 3,616,877 + AO353_16290 0.14 -0.9 3,616,878 - AO353_16290 0.14 +2.4 3,616,878 - AO353_16290 0.14 +1.4 3,616,878 - AO353_16290 0.14 +0.8 3,616,878 - AO353_16290 0.14 +0.9 3,616,878 - AO353_16290 0.14 +0.4 3,616,878 - AO353_16290 0.14 +0.5 3,616,900 + AO353_16290 0.17 -0.1 3,616,900 + AO353_16290 0.17 +1.1 3,616,900 + AO353_16290 0.17 -2.7 3,616,900 + AO353_16290 0.17 -0.1 3,616,901 - AO353_16290 0.17 -1.1 3,616,901 - AO353_16290 0.17 +0.8 3,616,901 - AO353_16290 0.17 -0.8 3,616,901 - AO353_16290 0.17 -0.8 3,616,901 - AO353_16290 0.17 +0.2 3,616,901 - AO353_16290 0.17 -0.3 3,616,901 - AO353_16290 0.17 +1.3 3,616,923 + AO353_16290 0.19 +0.1 3,616,924 - AO353_16290 0.19 -2.9 3,616,978 + AO353_16290 0.25 -0.0 3,616,978 + AO353_16290 0.25 -0.7 3,616,978 + AO353_16290 0.25 -2.3 3,616,978 + AO353_16290 0.25 -2.4 3,616,978 + AO353_16290 0.25 -0.2 3,616,979 - AO353_16290 0.25 +2.0 3,617,236 + AO353_16290 0.53 -1.6 3,617,236 + AO353_16290 0.53 -1.2 3,617,236 + AO353_16290 0.53 +0.2 3,617,236 + AO353_16290 0.53 -2.2 3,617,236 + AO353_16290 0.53 +0.5 3,617,237 - AO353_16290 0.53 -1.3 3,617,237 - AO353_16290 0.53 +0.6 3,617,237 - AO353_16290 0.53 +0.1 3,617,349 + AO353_16290 0.66 +1.4 3,617,349 + AO353_16290 0.66 -0.7 3,617,349 + AO353_16290 0.66 -1.6 3,617,349 + AO353_16290 0.66 +0.5 3,617,350 - AO353_16290 0.66 +0.1 3,617,350 - AO353_16290 0.66 -0.7 3,617,350 - AO353_16290 0.66 -1.9 3,617,350 - AO353_16290 0.66 -1.4 3,617,350 - AO353_16290 0.66 -0.5 3,617,376 - AO353_16290 0.69 -0.6 3,617,401 + AO353_16290 0.71 -0.6 3,617,401 + AO353_16290 0.71 +0.4 3,617,401 + AO353_16290 0.71 -0.3 3,617,402 - AO353_16290 0.71 -0.7 3,617,402 - AO353_16290 0.71 -0.4 3,617,402 - AO353_16290 0.71 -0.6 3,617,509 + AO353_16290 0.83 -1.7 3,617,509 + AO353_16290 0.83 +2.7 3,617,510 - AO353_16290 0.83 +0.2 3,617,510 - AO353_16290 0.83 -0.7 3,617,522 + AO353_16290 0.84 +0.2 3,617,522 + AO353_16290 0.84 +0.3 3,617,522 + AO353_16290 0.84 +0.5 3,617,523 - AO353_16290 0.85 -0.5 3,617,523 - AO353_16290 0.85 +0.8 3,617,523 - AO353_16290 0.85 +0.5
Or see this region's nucleotide sequence