Experiment: L-Leucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13475 and AO353_13480 are separated by 23 nucleotides AO353_13480 and AO353_13485 are separated by 229 nucleotides
AO353_13475: AO353_13475 - DNA-binding protein, at 2,989,977 to 2,990,927
_13475
AO353_13480: AO353_13480 - chaperone modulatory protein CbpM, at 2,990,951 to 2,991,256
_13480
AO353_13485: AO353_13485 - histidine kinase, at 2,991,486 to 2,992,625
_13485
Position (kb)
2990
2991
2992 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2989.992 kb on + strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.993 kb on - strand at 2989.995 kb on + strand at 2989.995 kb on + strand at 2989.995 kb on + strand at 2989.995 kb on + strand at 2989.995 kb on + strand at 2989.995 kb on + strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2989.996 kb on - strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.070 kb on + strand at 2990.071 kb on - strand at 2990.071 kb on - strand at 2990.071 kb on - strand at 2990.071 kb on - strand at 2990.071 kb on - strand at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.133 kb on + strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.134 kb on - strand, within AO353_13475 at 2990.169 kb on + strand, within AO353_13475 at 2990.169 kb on + strand, within AO353_13475 at 2990.169 kb on + strand, within AO353_13475 at 2990.170 kb on - strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.187 kb on + strand, within AO353_13475 at 2990.188 kb on - strand, within AO353_13475 at 2990.188 kb on - strand, within AO353_13475 at 2990.188 kb on - strand, within AO353_13475 at 2990.386 kb on + strand, within AO353_13475 at 2990.451 kb on + strand, within AO353_13475 at 2990.451 kb on + strand, within AO353_13475 at 2990.452 kb on - strand, within AO353_13475 at 2990.452 kb on - strand, within AO353_13475 at 2990.452 kb on - strand, within AO353_13475 at 2990.452 kb on - strand, within AO353_13475 at 2990.592 kb on + strand, within AO353_13475 at 2990.592 kb on + strand, within AO353_13475 at 2990.592 kb on + strand, within AO353_13475 at 2990.593 kb on - strand, within AO353_13475 at 2990.625 kb on + strand, within AO353_13475 at 2990.625 kb on + strand, within AO353_13475 at 2990.626 kb on - strand, within AO353_13475 at 2990.626 kb on - strand, within AO353_13475 at 2990.853 kb on - strand at 2990.853 kb on - strand at 2990.853 kb on - strand at 2990.853 kb on - strand at 2990.942 kb on + strand at 2990.943 kb on - strand at 2991.020 kb on + strand, within AO353_13480 at 2991.020 kb on + strand, within AO353_13480 at 2991.020 kb on + strand, within AO353_13480 at 2991.020 kb on + strand, within AO353_13480 at 2991.020 kb on + strand, within AO353_13480 at 2991.021 kb on - strand, within AO353_13480 at 2991.021 kb on - strand, within AO353_13480 at 2991.021 kb on - strand, within AO353_13480 at 2991.021 kb on - strand, within AO353_13480 at 2991.021 kb on - strand, within AO353_13480 at 2991.095 kb on + strand, within AO353_13480 at 2991.095 kb on + strand, within AO353_13480 at 2991.096 kb on - strand, within AO353_13480 at 2991.096 kb on - strand, within AO353_13480 at 2991.201 kb on + strand, within AO353_13480 at 2991.201 kb on + strand, within AO353_13480 at 2991.202 kb on - strand, within AO353_13480 at 2991.202 kb on - strand, within AO353_13480 at 2991.202 kb on - strand, within AO353_13480 at 2991.202 kb on - strand, within AO353_13480 at 2991.243 kb on + strand at 2991.254 kb on + strand at 2991.255 kb on - strand at 2991.361 kb on + strand at 2991.370 kb on + strand at 2991.370 kb on + strand at 2991.370 kb on + strand at 2991.370 kb on + strand at 2991.371 kb on - strand at 2991.371 kb on - strand at 2991.373 kb on + strand at 2991.389 kb on + strand at 2991.389 kb on + strand at 2991.417 kb on - strand at 2991.487 kb on + strand at 2991.487 kb on + strand at 2991.487 kb on + strand at 2991.488 kb on - strand at 2991.488 kb on - strand at 2991.519 kb on + strand at 2991.519 kb on + strand at 2991.519 kb on + strand at 2991.519 kb on + strand at 2991.519 kb on + strand at 2991.520 kb on - strand at 2991.520 kb on - strand at 2991.520 kb on - strand at 2991.520 kb on - strand at 2991.520 kb on - strand at 2991.623 kb on + strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.624 kb on - strand, within AO353_13485 at 2991.845 kb on + strand, within AO353_13485 at 2991.845 kb on + strand, within AO353_13485 at 2991.845 kb on + strand, within AO353_13485 at 2991.846 kb on - strand, within AO353_13485 at 2991.846 kb on - strand, within AO353_13485 at 2991.846 kb on - strand, within AO353_13485 at 2991.846 kb on - strand, within AO353_13485 at 2991.846 kb on - strand, within AO353_13485 at 2991.983 kb on + strand, within AO353_13485 at 2991.984 kb on - strand, within AO353_13485 at 2991.984 kb on - strand, within AO353_13485 at 2991.987 kb on + strand, within AO353_13485 at 2991.987 kb on + strand, within AO353_13485 at 2991.987 kb on + strand, within AO353_13485 at 2991.987 kb on + strand, within AO353_13485 at 2991.988 kb on - strand, within AO353_13485 at 2991.988 kb on - strand, within AO353_13485 at 2991.988 kb on - strand, within AO353_13485 at 2991.988 kb on - strand, within AO353_13485 at 2991.988 kb on - strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.054 kb on + strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.055 kb on - strand, within AO353_13485 at 2992.090 kb on - strand, within AO353_13485 at 2992.090 kb on - strand, within AO353_13485 at 2992.193 kb on - strand, within AO353_13485 at 2992.193 kb on - strand, within AO353_13485 at 2992.193 kb on - strand, within AO353_13485 at 2992.193 kb on - strand, within AO353_13485
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (C) remove 2,989,992 + -1.7 2,989,993 - -1.9 2,989,993 - +0.7 2,989,993 - -0.5 2,989,993 - -0.1 2,989,993 - -0.1 2,989,993 - +0.5 2,989,993 - -0.3 2,989,995 + -2.3 2,989,995 + -1.1 2,989,995 + -0.0 2,989,995 + +0.1 2,989,995 + -1.0 2,989,995 + -1.8 2,989,996 - -0.4 2,989,996 - +0.9 2,989,996 - -0.9 2,989,996 - -1.8 2,989,996 - +0.7 2,989,996 - +1.3 2,989,996 - -1.9 2,989,996 - -1.3 2,989,996 - +0.7 2,989,996 - +1.5 2,989,996 - -1.1 2,989,996 - -1.4 2,990,070 + +0.1 2,990,070 + +0.6 2,990,070 + +2.1 2,990,070 + -1.1 2,990,070 + -1.0 2,990,070 + -0.5 2,990,070 + -0.9 2,990,070 + -0.4 2,990,071 - -0.2 2,990,071 - -1.1 2,990,071 - +1.6 2,990,071 - -0.1 2,990,071 - +1.0 2,990,133 + AO353_13475 0.16 +1.7 2,990,133 + AO353_13475 0.16 +0.7 2,990,133 + AO353_13475 0.16 -1.7 2,990,133 + AO353_13475 0.16 -0.1 2,990,133 + AO353_13475 0.16 +0.4 2,990,133 + AO353_13475 0.16 -0.2 2,990,133 + AO353_13475 0.16 -1.1 2,990,134 - AO353_13475 0.17 +0.7 2,990,134 - AO353_13475 0.17 -0.8 2,990,134 - AO353_13475 0.17 +0.5 2,990,134 - AO353_13475 0.17 -0.5 2,990,134 - AO353_13475 0.17 -1.7 2,990,134 - AO353_13475 0.17 +0.7 2,990,134 - AO353_13475 0.17 -0.3 2,990,134 - AO353_13475 0.17 +1.5 2,990,134 - AO353_13475 0.17 +0.9 2,990,169 + AO353_13475 0.20 -0.1 2,990,169 + AO353_13475 0.20 +0.4 2,990,169 + AO353_13475 0.20 -1.3 2,990,170 - AO353_13475 0.20 -0.5 2,990,187 + AO353_13475 0.22 +0.3 2,990,187 + AO353_13475 0.22 -0.7 2,990,187 + AO353_13475 0.22 +0.5 2,990,187 + AO353_13475 0.22 -1.5 2,990,187 + AO353_13475 0.22 -0.8 2,990,187 + AO353_13475 0.22 -1.4 2,990,188 - AO353_13475 0.22 +0.7 2,990,188 - AO353_13475 0.22 -2.0 2,990,188 - AO353_13475 0.22 +0.2 2,990,386 + AO353_13475 0.43 -1.7 2,990,451 + AO353_13475 0.50 +0.4 2,990,451 + AO353_13475 0.50 +1.7 2,990,452 - AO353_13475 0.50 +1.4 2,990,452 - AO353_13475 0.50 +1.6 2,990,452 - AO353_13475 0.50 +0.2 2,990,452 - AO353_13475 0.50 -0.8 2,990,592 + AO353_13475 0.65 -0.8 2,990,592 + AO353_13475 0.65 -2.1 2,990,592 + AO353_13475 0.65 +0.7 2,990,593 - AO353_13475 0.65 -0.1 2,990,625 + AO353_13475 0.68 -1.1 2,990,625 + AO353_13475 0.68 -0.3 2,990,626 - AO353_13475 0.68 +0.4 2,990,626 - AO353_13475 0.68 -1.4 2,990,853 - -1.1 2,990,853 - +0.1 2,990,853 - +0.0 2,990,853 - +1.1 2,990,942 + +0.2 2,990,943 - -1.1 2,991,020 + AO353_13480 0.23 -2.8 2,991,020 + AO353_13480 0.23 -0.9 2,991,020 + AO353_13480 0.23 -1.7 2,991,020 + AO353_13480 0.23 -0.6 2,991,020 + AO353_13480 0.23 -0.1 2,991,021 - AO353_13480 0.23 +0.9 2,991,021 - AO353_13480 0.23 -0.1 2,991,021 - AO353_13480 0.23 -0.1 2,991,021 - AO353_13480 0.23 +0.4 2,991,021 - AO353_13480 0.23 -1.0 2,991,095 + AO353_13480 0.47 -1.2 2,991,095 + AO353_13480 0.47 +0.3 2,991,096 - AO353_13480 0.47 +0.7 2,991,096 - AO353_13480 0.47 -1.8 2,991,201 + AO353_13480 0.82 +1.0 2,991,201 + AO353_13480 0.82 +0.5 2,991,202 - AO353_13480 0.82 -0.9 2,991,202 - AO353_13480 0.82 -0.9 2,991,202 - AO353_13480 0.82 -0.1 2,991,202 - AO353_13480 0.82 -0.1 2,991,243 + +1.3 2,991,254 + -0.5 2,991,255 - +0.1 2,991,361 + +0.1 2,991,370 + +1.5 2,991,370 + +1.5 2,991,370 + +0.7 2,991,370 + -0.9 2,991,371 - +0.4 2,991,371 - -0.4 2,991,373 + -1.8 2,991,389 + +1.1 2,991,389 + -0.0 2,991,417 - -1.1 2,991,487 + +0.1 2,991,487 + -0.2 2,991,487 + -0.5 2,991,488 - -0.5 2,991,488 - -0.2 2,991,519 + -1.0 2,991,519 + -0.6 2,991,519 + +0.2 2,991,519 + -0.3 2,991,519 + -1.9 2,991,520 - -0.4 2,991,520 - -1.8 2,991,520 - -0.2 2,991,520 - -0.5 2,991,520 - -1.1 2,991,623 + AO353_13485 0.12 +0.5 2,991,624 - AO353_13485 0.12 +0.1 2,991,624 - AO353_13485 0.12 -2.2 2,991,624 - AO353_13485 0.12 -0.4 2,991,624 - AO353_13485 0.12 +0.2 2,991,624 - AO353_13485 0.12 -0.1 2,991,624 - AO353_13485 0.12 -0.3 2,991,845 + AO353_13485 0.31 -0.9 2,991,845 + AO353_13485 0.31 -1.0 2,991,845 + AO353_13485 0.31 -0.0 2,991,846 - AO353_13485 0.32 +1.2 2,991,846 - AO353_13485 0.32 -0.9 2,991,846 - AO353_13485 0.32 +1.6 2,991,846 - AO353_13485 0.32 -0.6 2,991,846 - AO353_13485 0.32 +0.3 2,991,983 + AO353_13485 0.44 -0.8 2,991,984 - AO353_13485 0.44 +1.5 2,991,984 - AO353_13485 0.44 +0.1 2,991,987 + AO353_13485 0.44 -0.9 2,991,987 + AO353_13485 0.44 -0.9 2,991,987 + AO353_13485 0.44 -0.1 2,991,987 + AO353_13485 0.44 -0.5 2,991,988 - AO353_13485 0.44 +0.9 2,991,988 - AO353_13485 0.44 +0.7 2,991,988 - AO353_13485 0.44 -0.3 2,991,988 - AO353_13485 0.44 -0.2 2,991,988 - AO353_13485 0.44 +0.3 2,992,054 + AO353_13485 0.50 -0.1 2,992,054 + AO353_13485 0.50 +2.6 2,992,054 + AO353_13485 0.50 +1.9 2,992,054 + AO353_13485 0.50 -1.6 2,992,054 + AO353_13485 0.50 -0.8 2,992,054 + AO353_13485 0.50 -0.1 2,992,054 + AO353_13485 0.50 +0.1 2,992,054 + AO353_13485 0.50 -1.1 2,992,054 + AO353_13485 0.50 -1.2 2,992,054 + AO353_13485 0.50 +0.0 2,992,054 + AO353_13485 0.50 -0.0 2,992,054 + AO353_13485 0.50 -1.0 2,992,054 + AO353_13485 0.50 +0.3 2,992,054 + AO353_13485 0.50 +0.4 2,992,055 - AO353_13485 0.50 -1.4 2,992,055 - AO353_13485 0.50 -0.7 2,992,055 - AO353_13485 0.50 +0.9 2,992,055 - AO353_13485 0.50 +1.5 2,992,055 - AO353_13485 0.50 -0.5 2,992,055 - AO353_13485 0.50 -0.4 2,992,055 - AO353_13485 0.50 -0.1 2,992,055 - AO353_13485 0.50 +1.3 2,992,055 - AO353_13485 0.50 -2.4 2,992,055 - AO353_13485 0.50 -0.1 2,992,090 - AO353_13485 0.53 +0.5 2,992,090 - AO353_13485 0.53 -2.4 2,992,193 - AO353_13485 0.62 +1.5 2,992,193 - AO353_13485 0.62 -0.4 2,992,193 - AO353_13485 0.62 -0.1 2,992,193 - AO353_13485 0.62 -0.3
Or see this region's nucleotide sequence