Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04735

Experiment: L-Leucine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_04725 and AO353_04730 are separated by 14 nucleotidesAO353_04730 and AO353_04735 are separated by 309 nucleotidesAO353_04735 and AO353_04740 are separated by 111 nucleotides AO353_04725: AO353_04725 - alginate O-acetyltransferase, at 1,022,986 to 1,024,161 _04725 AO353_04730: AO353_04730 - alginate O-acetyltransferase, at 1,024,176 to 1,024,829 _04730 AO353_04735: AO353_04735 - mannose-1-phosphate guanylyltransferase, at 1,025,139 to 1,026,590 _04735 AO353_04740: AO353_04740 - toxin, at 1,026,702 to 1,029,446 _04740 Position (kb) 1025 1026 1027Strain fitness (log2 ratio) -2 -1 0 1 2at 1024.168 kb on + strandat 1024.169 kb on - strandat 1024.169 kb on - strandat 1024.169 kb on - strandat 1024.175 kb on + strandat 1024.175 kb on + strandat 1024.175 kb on + strandat 1024.175 kb on + strandat 1024.176 kb on - strandat 1024.176 kb on - strandat 1024.187 kb on + strandat 1024.187 kb on + strandat 1024.187 kb on + strandat 1024.188 kb on - strandat 1024.225 kb on + strandat 1024.232 kb on + strandat 1024.278 kb on + strand, within AO353_04730at 1024.279 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.321 kb on - strand, within AO353_04730at 1024.331 kb on + strand, within AO353_04730at 1024.425 kb on + strand, within AO353_04730at 1024.426 kb on - strand, within AO353_04730at 1024.479 kb on + strand, within AO353_04730at 1024.479 kb on + strand, within AO353_04730at 1024.480 kb on - strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.482 kb on + strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.483 kb on - strand, within AO353_04730at 1024.764 kb on + strandat 1024.764 kb on + strandat 1024.764 kb on + strandat 1024.764 kb on + strandat 1024.764 kb on + strandat 1024.805 kb on - strandat 1024.861 kb on + strandat 1024.861 kb on + strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.862 kb on - strandat 1024.866 kb on - strandat 1024.882 kb on + strandat 1024.882 kb on + strandat 1024.882 kb on + strandat 1024.882 kb on + strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.883 kb on - strandat 1024.976 kb on - strandat 1024.976 kb on - strandat 1024.984 kb on + strandat 1024.984 kb on + strandat 1024.984 kb on + strandat 1024.985 kb on - strandat 1024.985 kb on - strandat 1024.985 kb on - strandat 1025.072 kb on + strandat 1025.072 kb on + strandat 1025.072 kb on + strandat 1025.072 kb on + strandat 1025.073 kb on - strandat 1025.073 kb on - strandat 1025.073 kb on - strandat 1025.073 kb on - strandat 1025.073 kb on - strandat 1025.109 kb on - strandat 1025.109 kb on - strandat 1025.132 kb on + strandat 1025.132 kb on + strandat 1025.133 kb on - strandat 1025.133 kb on - strandat 1025.479 kb on + strand, within AO353_04735at 1025.479 kb on + strand, within AO353_04735at 1025.479 kb on + strand, within AO353_04735at 1025.479 kb on + strand, within AO353_04735at 1025.479 kb on + strand, within AO353_04735at 1025.522 kb on + strand, within AO353_04735at 1025.595 kb on + strand, within AO353_04735at 1025.596 kb on - strand, within AO353_04735at 1025.596 kb on - strand, within AO353_04735at 1025.596 kb on - strand, within AO353_04735at 1025.597 kb on + strand, within AO353_04735at 1025.597 kb on + strand, within AO353_04735at 1025.597 kb on + strand, within AO353_04735at 1025.597 kb on + strand, within AO353_04735at 1025.598 kb on - strand, within AO353_04735at 1025.598 kb on - strand, within AO353_04735at 1025.707 kb on - strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.784 kb on + strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.785 kb on - strand, within AO353_04735at 1025.813 kb on + strand, within AO353_04735at 1026.008 kb on + strand, within AO353_04735at 1026.237 kb on + strand, within AO353_04735at 1026.238 kb on - strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.414 kb on + strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.415 kb on - strand, within AO353_04735at 1026.495 kb on + strandat 1026.495 kb on + strandat 1026.495 kb on + strandat 1026.495 kb on + strandat 1026.496 kb on - strandat 1026.496 kb on - strandat 1026.496 kb on - strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.530 kb on + strandat 1026.531 kb on - strandat 1026.531 kb on - strandat 1026.531 kb on - strandat 1026.531 kb on - strandat 1026.531 kb on - strandat 1026.534 kb on + strandat 1026.534 kb on + strandat 1026.534 kb on + strandat 1026.535 kb on - strandat 1026.535 kb on - strandat 1026.535 kb on - strandat 1026.545 kb on + strandat 1026.599 kb on + strandat 1026.608 kb on + strandat 1026.609 kb on - strandat 1026.609 kb on - strandat 1026.609 kb on - strandat 1026.609 kb on - strandat 1026.679 kb on + strandat 1026.731 kb on + strandat 1026.731 kb on + strandat 1026.732 kb on - strandat 1026.746 kb on - strandat 1026.819 kb on - strandat 1026.819 kb on - strandat 1026.932 kb on + strandat 1027.027 kb on + strand, within AO353_04740at 1027.047 kb on + strand, within AO353_04740at 1027.048 kb on - strand, within AO353_04740at 1027.055 kb on - strand, within AO353_04740at 1027.055 kb on - strand, within AO353_04740at 1027.055 kb on - strand, within AO353_04740at 1027.129 kb on + strand, within AO353_04740at 1027.140 kb on + strand, within AO353_04740at 1027.142 kb on + strand, within AO353_04740at 1027.142 kb on + strand, within AO353_04740at 1027.153 kb on + strand, within AO353_04740at 1027.153 kb on + strand, within AO353_04740at 1027.154 kb on - strand, within AO353_04740at 1027.154 kb on - strand, within AO353_04740at 1027.194 kb on - strand, within AO353_04740at 1027.194 kb on - strand, within AO353_04740at 1027.194 kb on - strand, within AO353_04740at 1027.195 kb on + strand, within AO353_04740at 1027.196 kb on - strand, within AO353_04740at 1027.196 kb on - strand, within AO353_04740at 1027.218 kb on - strand, within AO353_04740at 1027.220 kb on + strand, within AO353_04740at 1027.220 kb on + strand, within AO353_04740at 1027.221 kb on - strand, within AO353_04740at 1027.221 kb on - strand, within AO353_04740at 1027.221 kb on - strand, within AO353_04740at 1027.221 kb on - strand, within AO353_04740at 1027.221 kb on - strand, within AO353_04740at 1027.249 kb on + strand, within AO353_04740at 1027.249 kb on + strand, within AO353_04740at 1027.250 kb on - strand, within AO353_04740at 1027.251 kb on + strand, within AO353_04740at 1027.252 kb on - strand, within AO353_04740at 1027.286 kb on + strand, within AO353_04740at 1027.286 kb on + strandat 1027.286 kb on + strand, within AO353_04740at 1027.286 kb on + strand, within AO353_04740at 1027.287 kb on - strand, within AO353_04740at 1027.287 kb on - strand, within AO353_04740at 1027.288 kb on + strand, within AO353_04740at 1027.289 kb on - strand, within AO353_04740at 1027.289 kb on - strand, within AO353_04740at 1027.289 kb on - strand, within AO353_04740at 1027.301 kb on + strand, within AO353_04740at 1027.348 kb on + strand, within AO353_04740at 1027.349 kb on - strand, within AO353_04740at 1027.590 kb on + strand, within AO353_04740at 1027.590 kb on + strand, within AO353_04740at 1027.590 kb on + strand, within AO353_04740

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (C)
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1,024,168 + -0.6
1,024,169 - -1.2
1,024,169 - -1.6
1,024,169 - -0.6
1,024,175 + +1.0
1,024,175 + -0.0
1,024,175 + -0.9
1,024,175 + -1.1
1,024,176 - -0.9
1,024,176 - +0.7
1,024,187 + +1.3
1,024,187 + +0.3
1,024,187 + -2.4
1,024,188 - -1.8
1,024,225 + +1.3
1,024,232 + -0.1
1,024,278 + AO353_04730 0.16 +0.0
1,024,279 - AO353_04730 0.16 +0.7
1,024,321 - AO353_04730 0.22 +0.5
1,024,321 - AO353_04730 0.22 +0.4
1,024,321 - AO353_04730 0.22 -0.6
1,024,321 - AO353_04730 0.22 +1.1
1,024,321 - AO353_04730 0.22 -0.5
1,024,321 - AO353_04730 0.22 -0.4
1,024,321 - AO353_04730 0.22 +0.5
1,024,331 + AO353_04730 0.24 -1.5
1,024,425 + AO353_04730 0.38 +0.5
1,024,426 - AO353_04730 0.38 -0.9
1,024,479 + AO353_04730 0.46 +0.3
1,024,479 + AO353_04730 0.46 -0.7
1,024,480 - AO353_04730 0.46 -0.4
1,024,482 + AO353_04730 0.47 +1.3
1,024,482 + AO353_04730 0.47 +0.4
1,024,482 + AO353_04730 0.47 -1.8
1,024,482 + AO353_04730 0.47 -1.5
1,024,482 + AO353_04730 0.47 +0.8
1,024,482 + AO353_04730 0.47 +1.5
1,024,483 - AO353_04730 0.47 -1.3
1,024,483 - AO353_04730 0.47 -1.1
1,024,483 - AO353_04730 0.47 -0.7
1,024,483 - AO353_04730 0.47 +0.3
1,024,483 - AO353_04730 0.47 +0.5
1,024,483 - AO353_04730 0.47 +0.2
1,024,483 - AO353_04730 0.47 -0.8
1,024,483 - AO353_04730 0.47 -1.7
1,024,764 + -1.8
1,024,764 + -0.5
1,024,764 + -0.5
1,024,764 + -1.1
1,024,764 + -0.8
1,024,805 - -0.1
1,024,861 + -2.1
1,024,861 + -1.2
1,024,862 - -0.0
1,024,862 - -0.6
1,024,862 - -0.2
1,024,862 - -1.0
1,024,862 - -0.5
1,024,862 - -0.6
1,024,862 - +0.2
1,024,866 - +0.5
1,024,882 + +0.3
1,024,882 + +0.5
1,024,882 + -0.1
1,024,882 + +1.4
1,024,883 - +0.8
1,024,883 - -1.9
1,024,883 - -0.1
1,024,883 - -1.7
1,024,883 - -1.0
1,024,883 - +0.1
1,024,883 - -0.9
1,024,976 - +1.5
1,024,976 - +0.3
1,024,984 + +0.2
1,024,984 + -0.6
1,024,984 + -1.0
1,024,985 - -1.5
1,024,985 - +0.4
1,024,985 - -1.2
1,025,072 + -0.5
1,025,072 + +0.5
1,025,072 + -0.2
1,025,072 + -0.1
1,025,073 - -0.7
1,025,073 - -0.1
1,025,073 - +1.1
1,025,073 - +0.8
1,025,073 - +0.2
1,025,109 - +0.0
1,025,109 - -0.8
1,025,132 + -0.1
1,025,132 + -2.2
1,025,133 - +0.1
1,025,133 - -0.3
1,025,479 + AO353_04735 0.23 +0.0
1,025,479 + AO353_04735 0.23 -1.5
1,025,479 + AO353_04735 0.23 +1.8
1,025,479 + AO353_04735 0.23 -0.4
1,025,479 + AO353_04735 0.23 -1.5
1,025,522 + AO353_04735 0.26 -1.0
1,025,595 + AO353_04735 0.31 -1.5
1,025,596 - AO353_04735 0.31 -0.5
1,025,596 - AO353_04735 0.31 +0.3
1,025,596 - AO353_04735 0.31 -1.0
1,025,597 + AO353_04735 0.32 +0.3
1,025,597 + AO353_04735 0.32 +0.1
1,025,597 + AO353_04735 0.32 -1.0
1,025,597 + AO353_04735 0.32 +0.0
1,025,598 - AO353_04735 0.32 -1.2
1,025,598 - AO353_04735 0.32 +0.1
1,025,707 - AO353_04735 0.39 -1.7
1,025,784 + AO353_04735 0.44 -1.3
1,025,784 + AO353_04735 0.44 -0.3
1,025,784 + AO353_04735 0.44 -0.2
1,025,784 + AO353_04735 0.44 -0.7
1,025,784 + AO353_04735 0.44 -0.7
1,025,784 + AO353_04735 0.44 -0.1
1,025,784 + AO353_04735 0.44 -0.9
1,025,784 + AO353_04735 0.44 -0.1
1,025,784 + AO353_04735 0.44 +2.1
1,025,785 - AO353_04735 0.44 -1.0
1,025,785 - AO353_04735 0.44 -0.0
1,025,785 - AO353_04735 0.44 +1.5
1,025,785 - AO353_04735 0.44 -1.4
1,025,785 - AO353_04735 0.44 -0.4
1,025,785 - AO353_04735 0.44 -1.3
1,025,785 - AO353_04735 0.44 -1.4
1,025,813 + AO353_04735 0.46 -1.2
1,026,008 + AO353_04735 0.60 +0.0
1,026,237 + AO353_04735 0.76 -0.7
1,026,238 - AO353_04735 0.76 -1.0
1,026,414 + AO353_04735 0.88 -1.0
1,026,414 + AO353_04735 0.88 +0.8
1,026,414 + AO353_04735 0.88 +0.8
1,026,414 + AO353_04735 0.88 -0.6
1,026,414 + AO353_04735 0.88 +1.3
1,026,414 + AO353_04735 0.88 +0.1
1,026,415 - AO353_04735 0.88 -1.4
1,026,415 - AO353_04735 0.88 -1.2
1,026,415 - AO353_04735 0.88 -1.0
1,026,415 - AO353_04735 0.88 -1.6
1,026,415 - AO353_04735 0.88 +0.8
1,026,415 - AO353_04735 0.88 -1.7
1,026,415 - AO353_04735 0.88 -1.1
1,026,415 - AO353_04735 0.88 -0.6
1,026,495 + -0.1
1,026,495 + +0.6
1,026,495 + -2.1
1,026,495 + +0.3
1,026,496 - +0.9
1,026,496 - +1.0
1,026,496 - +0.6
1,026,530 + +1.1
1,026,530 + +0.5
1,026,530 + -1.1
1,026,530 + -0.4
1,026,530 + -0.0
1,026,530 + +1.1
1,026,530 + +0.1
1,026,530 + -1.8
1,026,531 - -1.4
1,026,531 - -0.5
1,026,531 - -0.8
1,026,531 - -0.8
1,026,531 - -1.2
1,026,534 + -0.1
1,026,534 + +0.5
1,026,534 + +0.6
1,026,535 - +0.1
1,026,535 - +0.1
1,026,535 - +0.5
1,026,545 + -1.7
1,026,599 + +0.0
1,026,608 + -1.9
1,026,609 - +1.0
1,026,609 - +0.0
1,026,609 - +1.0
1,026,609 - -0.5
1,026,679 + +0.8
1,026,731 + +0.2
1,026,731 + -0.7
1,026,732 - +0.9
1,026,746 - +2.1
1,026,819 - +0.2
1,026,819 - -0.4
1,026,932 + -1.9
1,027,027 + AO353_04740 0.12 -0.4
1,027,047 + AO353_04740 0.13 -1.3
1,027,048 - AO353_04740 0.13 +1.5
1,027,055 - AO353_04740 0.13 +0.4
1,027,055 - AO353_04740 0.13 -0.6
1,027,055 - AO353_04740 0.13 -1.1
1,027,129 + AO353_04740 0.16 +1.1
1,027,140 + AO353_04740 0.16 -0.4
1,027,142 + AO353_04740 0.16 -1.0
1,027,142 + AO353_04740 0.16 -0.3
1,027,153 + AO353_04740 0.16 +0.1
1,027,153 + AO353_04740 0.16 -0.1
1,027,154 - AO353_04740 0.16 -0.9
1,027,154 - AO353_04740 0.16 -0.5
1,027,194 - AO353_04740 0.18 +0.4
1,027,194 - AO353_04740 0.18 +0.4
1,027,194 - AO353_04740 0.18 +0.5
1,027,195 + AO353_04740 0.18 -0.9
1,027,196 - AO353_04740 0.18 +0.7
1,027,196 - AO353_04740 0.18 +0.6
1,027,218 - AO353_04740 0.19 -0.5
1,027,220 + AO353_04740 0.19 +0.0
1,027,220 + AO353_04740 0.19 -0.6
1,027,221 - AO353_04740 0.19 -0.2
1,027,221 - AO353_04740 0.19 +0.7
1,027,221 - AO353_04740 0.19 -1.9
1,027,221 - AO353_04740 0.19 +1.3
1,027,221 - AO353_04740 0.19 -0.7
1,027,249 + AO353_04740 0.20 -1.1
1,027,249 + AO353_04740 0.20 -1.1
1,027,250 - AO353_04740 0.20 -0.2
1,027,251 + AO353_04740 0.20 +0.5
1,027,252 - AO353_04740 0.20 -1.4
1,027,286 + AO353_04740 0.21 +1.5
1,027,286 + +1.5
1,027,286 + AO353_04740 0.21 +0.8
1,027,286 + AO353_04740 0.21 +1.8
1,027,287 - AO353_04740 0.21 +1.1
1,027,287 - AO353_04740 0.21 -0.5
1,027,288 + AO353_04740 0.21 +1.0
1,027,289 - AO353_04740 0.21 -1.4
1,027,289 - AO353_04740 0.21 -1.2
1,027,289 - AO353_04740 0.21 -0.7
1,027,301 + AO353_04740 0.22 -0.4
1,027,348 + AO353_04740 0.24 -1.4
1,027,349 - AO353_04740 0.24 -1.0
1,027,590 + AO353_04740 0.32 -0.2
1,027,590 + AO353_04740 0.32 +1.1
1,027,590 + AO353_04740 0.32 +1.5

Or see this region's nucleotide sequence