Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS07760 and ABZR87_RS07765 are separated by 162 nucleotides ABZR87_RS07765 and ABZR87_RS07770 are separated by 372 nucleotides
ABZR87_RS07760: ABZR87_RS07760 - HlyC/CorC family transporter, at 1,645,638 to 1,646,531
_RS07760
ABZR87_RS07765: ABZR87_RS07765 - hypothetical protein, at 1,646,694 to 1,648,220
_RS07765
ABZR87_RS07770: ABZR87_RS07770 - rRNA maturation RNase YbeY, at 1,648,593 to 1,649,405
_RS07770
Position (kb)
1646
1647
1648
1649 Strain fitness (log2 ratio)
-2
-1
0
1 at 1645.957 kb on + strand, within ABZR87_RS07760 at 1645.958 kb on - strand, within ABZR87_RS07760 at 1646.161 kb on + strand, within ABZR87_RS07760 at 1646.162 kb on - strand, within ABZR87_RS07760 at 1646.162 kb on - strand, within ABZR87_RS07760 at 1646.550 kb on + strand at 1646.551 kb on - strand at 1646.567 kb on + strand at 1646.567 kb on + strand at 1646.568 kb on - strand at 1646.568 kb on - strand at 1646.568 kb on - strand at 1646.568 kb on - strand at 1646.568 kb on - strand at 1646.568 kb on - strand at 1646.630 kb on + strand at 1646.890 kb on + strand, within ABZR87_RS07765 at 1646.891 kb on - strand, within ABZR87_RS07765 at 1646.891 kb on - strand, within ABZR87_RS07765 at 1646.891 kb on - strand, within ABZR87_RS07765 at 1646.976 kb on - strand, within ABZR87_RS07765 at 1646.976 kb on - strand, within ABZR87_RS07765 at 1647.614 kb on + strand, within ABZR87_RS07765 at 1647.614 kb on + strand, within ABZR87_RS07765 at 1647.615 kb on - strand, within ABZR87_RS07765 at 1647.615 kb on - strand, within ABZR87_RS07765 at 1648.102 kb on + strand at 1648.102 kb on + strand at 1648.102 kb on + strand at 1648.317 kb on - strand at 1648.317 kb on - strand at 1648.317 kb on - strand at 1648.330 kb on - strand at 1648.595 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 1,645,957 + ABZR87_RS07760 0.36 -0.7 1,645,958 - ABZR87_RS07760 0.36 +1.1 1,646,161 + ABZR87_RS07760 0.59 -1.9 1,646,162 - ABZR87_RS07760 0.59 +0.2 1,646,162 - ABZR87_RS07760 0.59 +0.5 1,646,550 + +1.1 1,646,551 - +0.2 1,646,567 + -0.2 1,646,567 + -0.3 1,646,568 - -0.8 1,646,568 - -0.1 1,646,568 - +1.3 1,646,568 - +0.7 1,646,568 - +0.2 1,646,568 - -0.7 1,646,630 + +0.4 1,646,890 + ABZR87_RS07765 0.13 +0.6 1,646,891 - ABZR87_RS07765 0.13 +0.2 1,646,891 - ABZR87_RS07765 0.13 -0.4 1,646,891 - ABZR87_RS07765 0.13 -0.1 1,646,976 - ABZR87_RS07765 0.18 -0.3 1,646,976 - ABZR87_RS07765 0.18 -0.5 1,647,614 + ABZR87_RS07765 0.60 -0.7 1,647,614 + ABZR87_RS07765 0.60 +1.2 1,647,615 - ABZR87_RS07765 0.60 -0.8 1,647,615 - ABZR87_RS07765 0.60 -0.3 1,648,102 + +0.0 1,648,102 + -0.4 1,648,102 + -0.1 1,648,317 - -1.2 1,648,317 - +0.4 1,648,317 - -0.2 1,648,330 - +0.2 1,648,595 - -0.1
Or see this region's nucleotide sequence