Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05865

Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
1,250,195	+				-0.0
1,250,195	+				-0.0
1,250,195	+				+1.5
1,250,195	+				-0.3
1,250,195	+				-1.1
1,250,195	+				-0.2
1,250,196	-				-1.2
1,250,196	-				+3.0
1,250,196	-				-0.8
1,250,228	+		ABZR87_RS05860	0.12	-0.4
1,250,228	+		ABZR87_RS05860	0.12	+0.2
1,250,228	+		ABZR87_RS05860	0.12	+0.7
1,250,228	+		ABZR87_RS05860	0.12	+0.1
1,250,319	+		ABZR87_RS05860	0.21	-0.0
1,250,319	+		ABZR87_RS05860	0.21	+0.1
1,250,319	+		ABZR87_RS05860	0.21	-0.2
1,250,320	-		ABZR87_RS05860	0.21	-0.6
1,250,390	+		ABZR87_RS05860	0.28	-0.1
1,250,402	+		ABZR87_RS05860	0.30	+0.2
1,250,402	+		ABZR87_RS05860	0.30	+0.2
1,250,402	+		ABZR87_RS05860	0.30	-0.1
1,250,402	+		ABZR87_RS05860	0.30	-0.8
1,250,403	-		ABZR87_RS05860	0.30	-0.5
1,250,403	-		ABZR87_RS05860	0.30	+0.4
1,250,403	-		ABZR87_RS05860	0.30	+0.1
1,250,437	-		ABZR87_RS05860	0.33	-0.4
1,250,437	-		ABZR87_RS05860	0.33	+0.1
1,250,488	+		ABZR87_RS05860	0.38	-0.4
1,250,488	+		ABZR87_RS05860	0.38	+0.5
1,250,488	+		ABZR87_RS05860	0.38	+1.1
1,250,488	+		ABZR87_RS05860	0.38	-0.2
1,250,488	+		ABZR87_RS05860	0.38	-0.1
1,250,489	-		ABZR87_RS05860	0.38	+0.3
1,250,559	+		ABZR87_RS05860	0.45	-0.5
1,250,674	-		ABZR87_RS05860	0.57	-0.2
1,250,891	+		ABZR87_RS05860	0.79	-0.0
1,250,892	-		ABZR87_RS05860	0.79	-1.0
1,250,903	+		ABZR87_RS05860	0.80	-3.1
1,250,903	+		ABZR87_RS05860	0.80	+0.2
1,250,903	+		ABZR87_RS05860	0.80	+0.3
1,250,903	+		ABZR87_RS05860	0.80	-0.1
1,250,903	+		ABZR87_RS05860	0.80	-0.2
1,250,903	+		ABZR87_RS05860	0.80	-0.8
1,250,903	+		ABZR87_RS05860	0.80	+1.1
1,250,903	+		ABZR87_RS05860	0.80	+1.0
1,250,904	-		ABZR87_RS05860	0.80	-1.3
1,250,904	-		ABZR87_RS05860	0.80	-0.1
1,250,904	-		ABZR87_RS05860	0.80	+0.5
1,250,913	+		ABZR87_RS05860	0.81	+0.4
1,250,913	+		ABZR87_RS05860	0.81	-0.1
1,250,988	+		ABZR87_RS05860	0.88	+0.1
1,250,988	+		ABZR87_RS05860	0.88	-2.3
1,250,988	+		ABZR87_RS05860	0.88	+0.4
1,250,989	-		ABZR87_RS05860	0.88	+1.0
1,250,989	-		ABZR87_RS05860	0.88	+0.1
1,250,989	-		ABZR87_RS05860	0.88	-0.3
1,251,014	+				+0.4
1,251,014	+				+0.6
1,251,015	-				-0.0
1,251,091	+				+0.7
1,251,091	+				-0.1
1,251,148	+				+0.1
1,251,148	+				+0.1
1,251,148	+				-0.9
1,251,148	+				-0.8
1,251,148	+				-0.1
1,251,148	+				-0.1
1,251,148	+				+1.1
1,251,148	+				-0.3
1,251,149	-				-0.1
1,251,149	-				-0.2
1,251,149	-				+0.1
1,251,149	-				-0.5
1,251,149	-				+0.9
1,251,149	-				+0.4
1,251,149	-				+0.1
1,251,392	+		ABZR87_RS05865	0.19	-0.4
1,251,392	+		ABZR87_RS05865	0.19	-1.2
1,251,393	-		ABZR87_RS05865	0.19	+1.2
1,251,393	-		ABZR87_RS05865	0.19	-0.1
1,251,403	-		ABZR87_RS05865	0.20	+0.8
1,251,448	+		ABZR87_RS05865	0.23	-0.4
1,251,448	+		ABZR87_RS05865	0.23	-0.3
1,251,449	-		ABZR87_RS05865	0.23	-0.6
1,251,449	-		ABZR87_RS05865	0.23	+0.0
1,251,449	-		ABZR87_RS05865	0.23	+1.0
1,251,594	-		ABZR87_RS05865	0.33	+0.3
1,251,594	-		ABZR87_RS05865	0.33	+0.1
1,251,594	-		ABZR87_RS05865	0.33	-0.2
1,251,594	-		ABZR87_RS05865	0.33	-0.5
1,251,614	+		ABZR87_RS05865	0.35	+0.3
1,251,614	+		ABZR87_RS05865	0.35	+0.6
1,251,614	+		ABZR87_RS05865	0.35	+0.2
1,251,614	+		ABZR87_RS05865	0.35	-0.0
1,251,614	+		ABZR87_RS05865	0.35	+1.2
1,251,614	+		ABZR87_RS05865	0.35	-0.4
1,251,615	-		ABZR87_RS05865	0.35	-1.2
1,251,615	-		ABZR87_RS05865	0.35	-0.1
1,251,615	-		ABZR87_RS05865	0.35	-0.3
1,251,615	-		ABZR87_RS05865	0.35	-0.3
1,251,615	-		ABZR87_RS05865	0.35	-0.4
1,251,699	+		ABZR87_RS05865	0.41	-2.1
1,251,699	+		ABZR87_RS05865	0.41	+0.0
1,251,797	+		ABZR87_RS05865	0.48	+0.3
1,251,798	-		ABZR87_RS05865	0.48	+1.5
1,251,832	+		ABZR87_RS05865	0.50	+0.6
1,251,832	+		ABZR87_RS05865	0.50	-0.5
1,251,833	-		ABZR87_RS05865	0.50	+0.3
1,251,835	+		ABZR87_RS05865	0.50	+1.2
1,251,836	-		ABZR87_RS05865	0.50	+0.3
1,251,836	-		ABZR87_RS05865	0.50	-0.1
1,251,892	+		ABZR87_RS05865	0.54	-0.4
1,251,892	+		ABZR87_RS05865	0.54	-1.4
1,251,892	+		ABZR87_RS05865	0.54	+0.3
1,251,892	+		ABZR87_RS05865	0.54	-0.8
1,251,892	+		ABZR87_RS05865	0.54	-0.1
1,251,892	+		ABZR87_RS05865	0.54	+0.8
1,251,892	+		ABZR87_RS05865	0.54	-0.7
1,251,893	-		ABZR87_RS05865	0.54	+0.0
1,252,084	+		ABZR87_RS05865	0.68	-1.3
1,252,084	+		ABZR87_RS05865	0.68	-0.4
1,252,084	+		ABZR87_RS05865	0.68	-0.6
1,252,084	+		ABZR87_RS05865	0.68	+0.5
1,252,085	-		ABZR87_RS05865	0.68	+0.0
1,252,085	-		ABZR87_RS05865	0.68	-0.4
1,252,085	-		ABZR87_RS05865	0.68	-0.1
1,252,085	-		ABZR87_RS05865	0.68	-1.4
1,252,085	-		ABZR87_RS05865	0.68	-1.1
1,252,085	-		ABZR87_RS05865	0.68	+0.3
1,252,085	-		ABZR87_RS05865	0.68	-0.2
1,252,085	-		ABZR87_RS05865	0.68	-0.4
1,252,127	+		ABZR87_RS05865	0.71	+0.3
1,252,127	+		ABZR87_RS05865	0.71	-1.0
1,252,137	+		ABZR87_RS05865	0.72	-0.6
1,252,137	+		ABZR87_RS05865	0.72	-0.7
1,252,138	-		ABZR87_RS05865	0.72	-0.5
1,252,138	-		ABZR87_RS05865	0.72	-1.4
1,252,138	-		ABZR87_RS05865	0.72	-0.2
1,252,138	-		ABZR87_RS05865	0.72	+0.2
1,252,264	-		ABZR87_RS05865	0.81	-0.8
1,252,268	+		ABZR87_RS05865	0.81	+1.6
1,252,268	+		ABZR87_RS05865	0.81	+0.0
1,252,300	+		ABZR87_RS05865	0.83	+0.7
1,252,300	+		ABZR87_RS05865	0.83	+2.2
1,252,300	+		ABZR87_RS05865	0.83	-0.9
1,252,300	+		ABZR87_RS05865	0.83	-0.5
1,252,300	+		ABZR87_RS05865	0.83	+0.3
1,252,300	+		ABZR87_RS05865	0.83	-0.1
1,252,300	+		ABZR87_RS05865	0.83	+0.1
1,252,301	-		ABZR87_RS05865	0.83	+1.8
1,252,301	-		ABZR87_RS05865	0.83	-0.8
1,252,301	-		ABZR87_RS05865	0.83	-0.1
1,252,301	-		ABZR87_RS05865	0.83	-0.5
1,252,301	-		ABZR87_RS05865	0.83	-1.3
1,252,349	+		ABZR87_RS05865	0.87	+0.5
1,252,351	+		ABZR87_RS05865	0.87	-0.2
1,252,351	+		ABZR87_RS05865	0.87	+0.9
1,252,351	+		ABZR87_RS05865	0.87	-0.1
1,252,351	+		ABZR87_RS05865	0.87	-0.0
1,252,351	+		ABZR87_RS05865	0.87	-0.1
1,252,351	+		ABZR87_RS05865	0.87	+0.3
1,252,352	-		ABZR87_RS05865	0.87	-0.8
1,252,352	-		ABZR87_RS05865	0.87	-0.3
1,252,407	+				-0.7
1,252,408	-				+0.9
1,252,408	-				-0.3
1,252,412	+				-0.4
1,252,412	+				-0.0
1,252,412	+				-0.5
1,252,412	+				+0.8
1,252,413	-				+0.0
1,252,413	-				-0.5
1,252,413	-				-1.3
1,252,413	-				+1.0
1,252,413	-				-0.1
1,252,447	+				+0.5
1,252,447	+				-1.3
1,252,447	+				-0.5
1,252,447	+				+0.6
1,252,447	+				+0.4
1,252,447	+				-0.7
1,252,447	+				-0.5
1,252,447	+				-0.5
1,252,447	+				-0.3
1,252,448	-				-0.5
1,252,448	-				+0.2
1,252,448	-				-0.1
1,252,448	-				+0.0
1,252,448	-				+0.5
1,252,528	+				+0.4
1,252,528	+				+0.3
1,252,528	+				-0.2
1,252,528	+				+0.2
1,252,528	+				+0.1
1,252,528	+				+0.4
1,252,528	+				-0.4
1,252,528	+				-1.1
1,252,529	-				-0.0
1,252,529	-				-0.3
1,252,529	-				-0.4
1,252,529	-				+0.4
1,252,529	-				+0.4
1,252,529	-				+2.5
1,252,529	-				+0.5
1,252,529	-				+0.0
1,252,529	-				-0.7
1,252,529	-				-1.1
1,252,529	-				-0.9
1,252,535	+				+0.5
1,252,535	+				+0.4
1,252,536	-				-0.9
1,252,572	-				-2.6
1,252,594	+				-1.0
1,252,594	+				+0.9
1,252,594	+				+0.3
1,252,595	-				-0.7
1,252,595	-				-0.3
1,252,762	+				-0.8
1,252,770	+				-0.5
1,252,770	+				-1.0
1,252,770	+				+0.2
1,252,770	+				-1.6
1,252,770	+				-0.1
1,252,770	+				+0.1
1,252,770	+				-0.2
1,252,770	+				-0.2
1,252,770	+				-0.4
1,252,770	+				+0.2
1,252,770	+				+0.0
1,252,770	+				-0.1
1,252,770	+				+0.6
1,252,770	+				-0.8
1,252,770	+				-0.0
1,252,771	-				-1.6
1,252,771	-				-0.4
1,252,771	-				-0.5
1,252,771	-				+0.2
1,252,771	-				-0.9
1,252,771	-				-2.6
1,252,771	-				+0.2
1,252,771	-				-1.4
1,252,771	-				+0.7
1,252,771	-				-0.8
1,252,771	-				-0.8
1,252,870	+		ABZR87_RS05870	0.12	-0.8
1,252,871	-		ABZR87_RS05870	0.12	-0.4
1,252,871	-		ABZR87_RS05870	0.12	-1.5
1,252,895	-		ABZR87_RS05870	0.14	-1.0
1,253,129	-		ABZR87_RS05870	0.32	+1.7
1,253,129	-		ABZR87_RS05870	0.32	+0.0
1,253,158	+		ABZR87_RS05870	0.34	-1.1
1,253,170	+		ABZR87_RS05870	0.35	-0.2
1,253,170	+		ABZR87_RS05870	0.35	-1.7
1,253,170	+		ABZR87_RS05870	0.35	+0.7
1,253,239	+		ABZR87_RS05870	0.40	+0.6
1,253,239	+		ABZR87_RS05870	0.40	+0.6
1,253,239	+		ABZR87_RS05870	0.40	-0.4
1,253,239	+		ABZR87_RS05870	0.40	-0.4
1,253,239	+		ABZR87_RS05870	0.40	+0.7
1,253,239	+		ABZR87_RS05870	0.40	-0.6
1,253,239	+		ABZR87_RS05870	0.40	-0.4
1,253,239	+		ABZR87_RS05870	0.40	+0.3
1,253,240	-		ABZR87_RS05870	0.40	-0.7
1,253,240	-		ABZR87_RS05870	0.40	-0.1
1,253,240	-		ABZR87_RS05870	0.40	-0.3
1,253,240	-		ABZR87_RS05870	0.40	-0.2
1,253,240	-		ABZR87_RS05870	0.40	+0.5
1,253,240	-		ABZR87_RS05870	0.40	+1.4
1,253,240	-		ABZR87_RS05870	0.40	-0.3
1,253,240	-		ABZR87_RS05870	0.40	+0.5
1,253,240	-		ABZR87_RS05870	0.40	-0.5
1,253,240	-		ABZR87_RS05870	0.40	-0.1
1,253,318	+		ABZR87_RS05870	0.46	+0.1
1,253,318	+		ABZR87_RS05870	0.46	+0.1
1,253,318	+		ABZR87_RS05870	0.46	-0.1
1,253,318	+		ABZR87_RS05870	0.46	-0.5
1,253,318	+		ABZR87_RS05870	0.46	+0.1
1,253,318	+		ABZR87_RS05870	0.46	-1.6
1,253,319	-		ABZR87_RS05870	0.46	+0.3
1,253,319	-		ABZR87_RS05870	0.46	-0.2
1,253,319	-		ABZR87_RS05870	0.46	+1.0
1,253,319	-		ABZR87_RS05870	0.46	-0.9
1,253,319	-		ABZR87_RS05870	0.46	-0.5
1,253,319	-		ABZR87_RS05870	0.46	+0.2
1,253,334	+		ABZR87_RS05870	0.47	-0.3
1,253,484	+		ABZR87_RS05870	0.58	-0.5
1,253,484	+		ABZR87_RS05870	0.58	+0.1
1,253,484	+		ABZR87_RS05870	0.58	-0.3
1,253,484	+		ABZR87_RS05870	0.58	+0.3
1,253,485	-		ABZR87_RS05870	0.59	-0.2
1,253,485	-		ABZR87_RS05870	0.59	-0.2
1,253,485	-		ABZR87_RS05870	0.59	-0.2
1,253,485	-		ABZR87_RS05870	0.59	-0.8
1,253,500	+		ABZR87_RS05870	0.60	-0.4
1,253,501	-		ABZR87_RS05870	0.60	-0.2