Experiment: Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS00965 and ABZR87_RS00970 are separated by 150 nucleotides ABZR87_RS00970 and ABZR87_RS00975 are separated by 135 nucleotides
ABZR87_RS00965: ABZR87_RS00965 - bifunctional anthranilate synthase component I family protein/class IV aminotransferase, at 190,879 to 192,777
_RS00965
ABZR87_RS00970: ABZR87_RS00970 - molecular chaperone DnaJ, at 192,928 to 194,076
_RS00970
ABZR87_RS00975: ABZR87_RS00975 - molecular chaperone DnaK, at 194,212 to 196,164
_RS00975
Position (kb) 192
193
194
195 Strain fitness (log2 ratio) -2
-1
0
1
2 at 192.225 kb on - strand, within ABZR87_RS00965 at 192.258 kb on - strand, within ABZR87_RS00965 at 192.258 kb on - strand, within ABZR87_RS00965 at 192.299 kb on + strand, within ABZR87_RS00965 at 192.299 kb on + strand, within ABZR87_RS00965 at 192.300 kb on - strand, within ABZR87_RS00965 at 192.305 kb on + strand, within ABZR87_RS00965 at 192.305 kb on + strand, within ABZR87_RS00965 at 192.306 kb on - strand, within ABZR87_RS00965 at 192.306 kb on - strand, within ABZR87_RS00965 at 192.306 kb on - strand, within ABZR87_RS00965 at 192.317 kb on + strand, within ABZR87_RS00965 at 192.317 kb on + strand, within ABZR87_RS00965 at 192.318 kb on - strand, within ABZR87_RS00965 at 192.318 kb on - strand, within ABZR87_RS00965 at 192.318 kb on - strand, within ABZR87_RS00965 at 192.318 kb on - strand, within ABZR87_RS00965 at 192.318 kb on - strand, within ABZR87_RS00965 at 192.366 kb on + strand, within ABZR87_RS00965 at 192.367 kb on - strand, within ABZR87_RS00965 at 192.367 kb on - strand, within ABZR87_RS00965 at 192.367 kb on - strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.368 kb on + strand, within ABZR87_RS00965 at 192.369 kb on - strand, within ABZR87_RS00965 at 192.369 kb on - strand, within ABZR87_RS00965 at 192.369 kb on - strand, within ABZR87_RS00965 at 192.369 kb on - strand, within ABZR87_RS00965 at 192.369 kb on - strand, within ABZR87_RS00965 at 192.378 kb on - strand, within ABZR87_RS00965 at 192.378 kb on - strand, within ABZR87_RS00965 at 192.579 kb on - strand, within ABZR87_RS00965 at 192.680 kb on + strand at 192.680 kb on + strand at 192.680 kb on + strand at 192.681 kb on - strand at 192.681 kb on - strand at 192.681 kb on - strand at 192.681 kb on - strand at 192.689 kb on + strand at 192.808 kb on + strand at 192.808 kb on + strand at 192.808 kb on + strand at 192.809 kb on - strand at 192.809 kb on - strand at 192.809 kb on - strand at 192.827 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.865 kb on + strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.866 kb on - strand at 192.874 kb on - strand at 192.883 kb on - strand at 192.911 kb on + strand at 192.917 kb on + strand at 192.917 kb on + strand at 192.918 kb on - strand at 192.918 kb on - strand at 192.929 kb on + strand at 192.929 kb on + strand at 192.930 kb on - strand at 192.930 kb on - strand at 192.930 kb on - strand at 192.949 kb on + strand at 192.950 kb on - strand at 192.950 kb on - strand at 192.950 kb on - strand at 193.082 kb on + strand, within ABZR87_RS00970 at 193.082 kb on + strand, within ABZR87_RS00970 at 193.313 kb on + strand, within ABZR87_RS00970 at 193.313 kb on + strand, within ABZR87_RS00970 at 193.357 kb on - strand, within ABZR87_RS00970 at 194.118 kb on - strand at 194.181 kb on - strand at 194.181 kb on - strand at 194.181 kb on - strand at 194.185 kb on + strand at 194.213 kb on + strand at 194.213 kb on + strand at 194.213 kb on + strand at 194.213 kb on + strand at 194.214 kb on - strand at 194.214 kb on - strand at 194.256 kb on + strand at 194.354 kb on + strand at 194.355 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) remove 192,225 - ABZR87_RS00965 0.71 +0.2 192,258 - ABZR87_RS00965 0.73 -0.3 192,258 - ABZR87_RS00965 0.73 +0.5 192,299 + ABZR87_RS00965 0.75 -0.2 192,299 + ABZR87_RS00965 0.75 -0.1 192,300 - ABZR87_RS00965 0.75 -0.0 192,305 + ABZR87_RS00965 0.75 +0.4 192,305 + ABZR87_RS00965 0.75 +0.6 192,306 - ABZR87_RS00965 0.75 -0.4 192,306 - ABZR87_RS00965 0.75 -0.2 192,306 - ABZR87_RS00965 0.75 +0.1 192,317 + ABZR87_RS00965 0.76 -0.3 192,317 + ABZR87_RS00965 0.76 +0.4 192,318 - ABZR87_RS00965 0.76 +1.5 192,318 - ABZR87_RS00965 0.76 +0.5 192,318 - ABZR87_RS00965 0.76 +0.2 192,318 - ABZR87_RS00965 0.76 +0.0 192,318 - ABZR87_RS00965 0.76 +0.9 192,366 + ABZR87_RS00965 0.78 +0.5 192,367 - ABZR87_RS00965 0.78 -0.8 192,367 - ABZR87_RS00965 0.78 +0.3 192,367 - ABZR87_RS00965 0.78 +0.1 192,368 + ABZR87_RS00965 0.78 +0.3 192,368 + ABZR87_RS00965 0.78 +0.2 192,368 + ABZR87_RS00965 0.78 +0.5 192,368 + ABZR87_RS00965 0.78 +1.0 192,368 + ABZR87_RS00965 0.78 -0.7 192,368 + ABZR87_RS00965 0.78 +0.5 192,368 + ABZR87_RS00965 0.78 -0.2 192,368 + ABZR87_RS00965 0.78 -0.1 192,368 + ABZR87_RS00965 0.78 +1.0 192,369 - ABZR87_RS00965 0.78 +1.2 192,369 - ABZR87_RS00965 0.78 +0.5 192,369 - ABZR87_RS00965 0.78 +0.3 192,369 - ABZR87_RS00965 0.78 -0.3 192,369 - ABZR87_RS00965 0.78 -0.5 192,378 - ABZR87_RS00965 0.79 -0.1 192,378 - ABZR87_RS00965 0.79 +0.1 192,579 - ABZR87_RS00965 0.90 +0.1 192,680 + +0.8 192,680 + -1.3 192,680 + +0.4 192,681 - -0.0 192,681 - -0.2 192,681 - -0.5 192,681 - -0.6 192,689 + -0.2 192,808 + +0.2 192,808 + -0.2 192,808 + -0.7 192,809 - -0.1 192,809 - -0.5 192,809 - +0.9 192,827 + -0.4 192,865 + +0.1 192,865 + +0.1 192,865 + +1.0 192,865 + +0.3 192,865 + +0.3 192,865 + -0.5 192,865 + +0.3 192,866 - -0.1 192,866 - +0.9 192,866 - -0.5 192,866 - +0.8 192,866 - -0.7 192,866 - -0.8 192,866 - -0.0 192,874 - -0.3 192,883 - -0.8 192,911 + -0.1 192,917 + +0.6 192,917 + +1.4 192,918 - +0.6 192,918 - -0.8 192,929 + -0.0 192,929 + +0.4 192,930 - -0.9 192,930 - +0.2 192,930 - -0.2 192,949 + +0.1 192,950 - -0.0 192,950 - -1.0 192,950 - +0.6 193,082 + ABZR87_RS00970 0.13 -1.9 193,082 + ABZR87_RS00970 0.13 +0.1 193,313 + ABZR87_RS00970 0.34 +0.1 193,313 + ABZR87_RS00970 0.34 -1.5 193,357 - ABZR87_RS00970 0.37 -1.9 194,118 - -1.9 194,181 - -0.0 194,181 - +0.2 194,181 - +0.7 194,185 + -0.1 194,213 + +0.8 194,213 + +0.2 194,213 + +0.5 194,213 + -0.9 194,214 - -0.2 194,214 - +1.9 194,256 + -1.9 194,354 + -1.4 194,355 - +0.1
Or see this region's nucleotide sequence