Experiment: Carbon source Sucrose 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shewana3_0069 and mogA are separated by 205 nucleotides mogA and Shewana3_0071 are separated by 33 nucleotides Shewana3_0071 and Shewana3_0072 are separated by 151 nucleotides
Shewana3_0069: Shewana3_0069 - Fructokinase (EC 2.7.1.4) <small>(from data)</small>, at 82,632 to 83,591
_0069
Shewana3_0070: mogA - molybdenum cofactor biosynthesis protein (RefSeq), at 83,797 to 84,330
mogA
Shewana3_0071: Shewana3_0071 - hypothetical protein (RefSeq), at 84,364 to 84,582
_0071
Shewana3_0072: Shewana3_0072 - transcriptional regulator (RefSeq), at 84,734 to 85,777
_0072
Position (kb) 84
85 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 83.371 kb on - strand, within Shewana3_0069 at 83.428 kb on + strand, within Shewana3_0069 at 83.485 kb on + strand, within Shewana3_0069 at 83.490 kb on + strand, within Shewana3_0069 at 83.527 kb on - strand at 83.529 kb on + strand at 83.572 kb on + strand at 83.586 kb on + strand at 83.707 kb on + strand at 83.775 kb on - strand at 83.807 kb on - strand at 83.984 kb on - strand, within mogA at 84.034 kb on - strand, within mogA at 84.055 kb on - strand, within mogA at 84.082 kb on + strand, within mogA at 84.254 kb on + strand, within mogA at 84.268 kb on - strand, within mogA at 84.272 kb on - strand, within mogA at 84.460 kb on - strand, within Shewana3_0071 at 84.505 kb on + strand, within Shewana3_0071 at 84.505 kb on + strand, within Shewana3_0071 at 84.513 kb on - strand, within Shewana3_0071 at 84.541 kb on + strand, within Shewana3_0071 at 84.542 kb on - strand, within Shewana3_0071 at 84.566 kb on + strand at 84.569 kb on - strand at 84.584 kb on - strand at 84.592 kb on - strand at 84.849 kb on + strand, within Shewana3_0072 at 84.849 kb on + strand, within Shewana3_0072 at 84.912 kb on + strand, within Shewana3_0072 at 85.071 kb on + strand, within Shewana3_0072 at 85.194 kb on + strand, within Shewana3_0072 at 85.227 kb on - strand, within Shewana3_0072 at 85.268 kb on - strand, within Shewana3_0072 at 85.272 kb on + strand, within Shewana3_0072 at 85.304 kb on + strand, within Shewana3_0072 at 85.380 kb on + strand, within Shewana3_0072 at 85.425 kb on - strand, within Shewana3_0072 at 85.517 kb on - strand, within Shewana3_0072
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Sucrose 10 mM remove 83,371 - Shewana3_0069 0.77 -3.0 83,428 + Shewana3_0069 0.83 -3.8 83,485 + Shewana3_0069 0.89 -2.8 83,490 + Shewana3_0069 0.89 -3.8 83,527 - -4.1 83,529 + -4.9 83,572 + +2.0 83,586 + -0.8 83,707 + -0.3 83,775 - -1.2 83,807 - +1.0 83,984 - mogA Shewana3_0070 0.35 -0.1 84,034 - mogA Shewana3_0070 0.44 -2.3 84,055 - mogA Shewana3_0070 0.48 -1.1 84,082 + mogA Shewana3_0070 0.53 -1.0 84,254 + mogA Shewana3_0070 0.86 -1.2 84,268 - mogA Shewana3_0070 0.88 -2.0 84,272 - mogA Shewana3_0070 0.89 -2.4 84,460 - Shewana3_0071 0.44 -0.4 84,505 + Shewana3_0071 0.64 -0.3 84,505 + Shewana3_0071 0.64 -0.1 84,513 - Shewana3_0071 0.68 -0.2 84,541 + Shewana3_0071 0.81 -0.6 84,542 - Shewana3_0071 0.81 -0.5 84,566 + -0.2 84,569 - +0.8 84,584 - -0.3 84,592 - -0.1 84,849 + Shewana3_0072 0.11 +0.7 84,849 + Shewana3_0072 0.11 +0.5 84,912 + Shewana3_0072 0.17 +0.2 85,071 + Shewana3_0072 0.32 +0.4 85,194 + Shewana3_0072 0.44 -1.7 85,227 - Shewana3_0072 0.47 +0.0 85,268 - Shewana3_0072 0.51 +0.0 85,272 + Shewana3_0072 0.52 +0.7 85,304 + Shewana3_0072 0.55 -0.0 85,380 + Shewana3_0072 0.62 +1.3 85,425 - Shewana3_0072 0.66 -0.2 85,517 - Shewana3_0072 0.75 +0.4
Or see this region's nucleotide sequence