Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37330

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
3,851,606	+		RR42_RS37325	0.82	-1.4
3,851,607	-		RR42_RS37325	0.82	+1.4
3,851,680	+		RR42_RS37325	0.84	-0.8
3,851,680	+		RR42_RS37325	0.84	-1.1
3,851,680	+		RR42_RS37325	0.84	-0.5
3,851,680	+		RR42_RS37325	0.84	+0.4
3,851,680	+		RR42_RS37325	0.84	-1.3
3,851,681	-				+0.4
3,851,681	-		RR42_RS37325	0.84	-0.5
3,851,681	-		RR42_RS37325	0.84	+0.1
3,851,681	-		RR42_RS37325	0.84	-0.2
3,851,695	-		RR42_RS37325	0.84	-0.5
3,851,695	-		RR42_RS37325	0.84	-0.2
3,851,744	+		RR42_RS37325	0.85	-1.0
3,851,744	+		RR42_RS37325	0.85	+0.6
3,851,865	-		RR42_RS37325	0.88	-0.3
3,851,865	-		RR42_RS37325	0.88	-2.0
3,851,867	+		RR42_RS37325	0.88	-0.8
3,851,867	+		RR42_RS37325	0.88	-2.4
3,851,868	-		RR42_RS37325	0.88	-0.6
3,851,868	-		RR42_RS37325	0.88	+0.6
3,851,918	+		RR42_RS37325	0.89	-3.6
3,852,065	+				+0.3
3,852,065	+				-0.5
3,852,066	-				+1.0
3,852,066	-				-0.8
3,852,119	+				-0.6
3,852,120	-				-0.6
3,852,207	-				-0.3
3,852,207	-				+0.0
3,852,207	-				+0.2
3,852,207	-				-0.8
3,852,334	+				-2.3
3,852,334	+				+2.9
3,852,335	-				-0.3
3,852,336	+				-0.5
3,852,336	+				+0.6
3,852,336	+				-0.5
3,852,336	+				-0.4
3,852,336	+				-0.4
3,852,336	+				-0.6
3,852,336	+				-2.8
3,852,336	+				-0.9
3,852,336	+				-1.4
3,852,336	+				-0.5
3,852,336	+				-0.2
3,852,337	-				-1.2
3,852,489	+				-1.4
3,852,489	+				-0.3
3,852,490	-				-0.2
3,852,499	+				-1.1
3,852,499	+				-0.8
3,852,500	-				-0.0
3,852,502	+		RR42_RS37330	0.10	-1.0
3,852,503	-		RR42_RS37330	0.10	-0.2
3,852,503	-		RR42_RS37330	0.10	-0.1
3,852,772	+		RR42_RS37330	0.32	-1.0
3,852,772	+		RR42_RS37330	0.32	-1.5
3,852,773	-		RR42_RS37330	0.32	+0.0
3,852,782	+		RR42_RS37330	0.33	-1.0
3,852,790	+		RR42_RS37330	0.34	-0.1
3,852,790	+		RR42_RS37330	0.34	-1.0
3,852,791	-		RR42_RS37330	0.34	+0.4
3,852,791	-		RR42_RS37330	0.34	-2.5
3,852,985	+		RR42_RS37330	0.49	-2.3
3,852,985	+		RR42_RS37330	0.49	-0.2
3,852,986	-		RR42_RS37330	0.50	-0.9
3,852,986	-		RR42_RS37330	0.50	-0.3
3,852,986	-		RR42_RS37330	0.50	-0.0
3,853,331	+		RR42_RS37330	0.78	-1.3
3,853,369	+		RR42_RS37330	0.81	+0.6
3,853,369	+		RR42_RS37330	0.81	-0.8
3,853,463	-		RR42_RS37330	0.88	-1.0
3,853,578	+				-1.2
3,853,653	+				-1.2
3,853,654	-				-1.7
3,853,654	-				-0.4
3,853,737	+				+0.8
3,853,737	+				-0.4
3,853,737	+				+0.5
3,853,737	+				+0.2
3,853,737	+				-0.5
3,853,738	-				-0.4
3,853,738	-				+0.1
3,853,738	-				-1.0
3,853,738	-				-1.5
3,853,768	-				-0.6
3,853,768	-				-0.2
3,853,949	+		RR42_RS37335	0.15	+0.5
3,854,259	+		RR42_RS37335	0.28	-0.0
3,854,260	-		RR42_RS37335	0.29	-0.4
3,854,268	+		RR42_RS37335	0.29	-0.4
3,854,269	-		RR42_RS37335	0.29	-0.1
3,854,269	-		RR42_RS37335	0.29	-0.5
3,854,478	+		RR42_RS37335	0.38	-1.1
3,854,479	-		RR42_RS37335	0.38	-0.6
3,854,479	-		RR42_RS37335	0.38	-0.3
3,854,479	-		RR42_RS37335	0.38	-0.6
3,854,484	+		RR42_RS37335	0.38	-0.8
3,854,484	+		RR42_RS37335	0.38	-0.6
3,854,485	-		RR42_RS37335	0.38	-1.9
3,854,485	-		RR42_RS37335	0.38	+0.2
3,854,487	+		RR42_RS37335	0.38	+0.4
3,854,488	-		RR42_RS37335	0.38	-0.9