Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31530

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,450,646	+		RR42_RS31520	0.83	-0.6
2,450,647	-		RR42_RS31520	0.83	-0.4
2,450,647	-		RR42_RS31520	0.83	-0.1
2,450,700	+		RR42_RS31520	0.88	-1.9
2,450,875	+				+0.8
2,450,875	+				+0.1
2,450,876	-				-0.2
2,450,876	-				-0.5
2,450,888	+				-0.2
2,450,888	+				-0.6
2,450,889	-				+0.1
2,450,889	-				+0.2
2,450,889	-				-0.3
2,451,083	+		RR42_RS31525	0.19	-0.9
2,451,083	+		RR42_RS31525	0.19	+0.1
2,451,084	-		RR42_RS31525	0.19	+0.2
2,451,084	-		RR42_RS31525	0.19	-0.2
2,451,176	+		RR42_RS31525	0.34	+0.6
2,451,176	+		RR42_RS31525	0.34	-0.5
2,451,176	+		RR42_RS31525	0.34	+0.6
2,451,176	+		RR42_RS31525	0.34	+0.2
2,451,177	-		RR42_RS31525	0.34	+1.8
2,451,206	+		RR42_RS31525	0.38	-0.7
2,451,206	+		RR42_RS31525	0.38	+0.9
2,451,207	-		RR42_RS31525	0.38	-0.2
2,451,207	-		RR42_RS31525	0.38	-0.6
2,451,215	+		RR42_RS31525	0.40	-0.1
2,451,216	-		RR42_RS31525	0.40	+0.6
2,451,216	-		RR42_RS31525	0.40	+0.2
2,451,369	-		RR42_RS31525	0.64	+0.6
2,451,513	-		RR42_RS31525	0.86	+0.6
2,451,555	+				-0.1
2,451,556	-				-0.5
2,451,599	+				-1.7
2,451,599	+				-0.1
2,452,475	-		RR42_RS31530	0.61	-1.7
2,452,619	+		RR42_RS31530	0.71	-2.3
2,452,960	+				+0.1
2,452,961	-				-1.0
2,453,583	+		RR42_RS31535	0.80	+0.6
2,453,584	-		RR42_RS31535	0.80	-1.8
2,453,584	-		RR42_RS31535	0.80	+0.0
2,453,584	-		RR42_RS31535	0.80	-0.8
2,453,674	-				-0.7
2,453,811	+				-0.2
2,453,853	+				+0.0
2,453,853	+				-3.1
2,453,854	-				-0.3
2,453,854	-				+0.5
2,453,968	+				-0.4
2,454,039	+				+0.7