Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31320

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,401,106	+		RR42_RS31315	0.54	+0.0
2,401,292	-		RR42_RS31315	0.65	+0.8
2,401,292	-		RR42_RS31315	0.65	+0.6
2,401,605	+		RR42_RS31315	0.84	+0.2
2,401,605	+		RR42_RS31315	0.84	-0.6
2,401,606	-		RR42_RS31315	0.84	-0.2
2,401,621	+		RR42_RS31315	0.84	-0.1
2,401,639	+		RR42_RS31315	0.85	-0.3
2,401,640	-		RR42_RS31315	0.86	-0.1
2,401,640	-		RR42_RS31315	0.86	-0.6
2,401,941	+				-0.3
2,401,941	+				+0.9
2,402,043	+				+0.9
2,402,043	+				-0.6
2,402,043	+				-0.2
2,402,156	+				+0.7
2,402,156	+				-0.6
2,402,157	-				-0.5
2,402,157	-				-1.0
2,402,157	-				-0.5
2,402,157	-				-0.8
2,402,325	-		RR42_RS31320	0.17	+0.1
2,402,396	+		RR42_RS31320	0.23	+1.6
2,402,396	+		RR42_RS31320	0.23	-0.1
2,402,396	+		RR42_RS31320	0.23	+2.7
2,402,396	+		RR42_RS31320	0.23	+1.0
2,402,396	+		RR42_RS31320	0.23	-0.1
2,402,396	+		RR42_RS31320	0.23	+0.4
2,402,396	+		RR42_RS31320	0.23	+0.4
2,402,397	-		RR42_RS31320	0.23	+1.0
2,402,397	-		RR42_RS31320	0.23	+0.7
2,402,397	-		RR42_RS31320	0.23	+0.8
2,402,397	-		RR42_RS31320	0.23	-0.3
2,402,462	+		RR42_RS31320	0.28	-0.2
2,402,467	-		RR42_RS31320	0.28	+0.1
2,402,467	-		RR42_RS31320	0.28	+1.0
2,402,730	-		RR42_RS31320	0.48	-0.3
2,402,741	+		RR42_RS31320	0.49	+0.0
2,402,780	+		RR42_RS31320	0.52	-1.2
2,402,780	+		RR42_RS31320	0.52	+0.0
2,402,780	+		RR42_RS31320	0.52	+1.0
2,402,780	+		RR42_RS31320	0.52	-0.1
2,402,781	-		RR42_RS31320	0.52	+0.2
2,402,781	-		RR42_RS31320	0.52	+0.6
2,402,837	+		RR42_RS31320	0.56	+1.1
2,402,837	+		RR42_RS31320	0.56	+0.5
2,402,837	+		RR42_RS31320	0.56	-0.1
2,403,044	+		RR42_RS31320	0.72	-1.5
2,403,045	-		RR42_RS31320	0.72	-0.6
2,403,176	+		RR42_RS31320	0.82	-1.2
2,403,176	+		RR42_RS31320	0.82	+1.0
2,403,176	+		RR42_RS31320	0.82	-0.4
2,403,177	-		RR42_RS31320	0.82	+1.1
2,403,177	-		RR42_RS31320	0.82	+0.0
2,403,177	-		RR42_RS31320	0.82	-0.3
2,403,222	+		RR42_RS31320	0.86	+1.6
2,403,272	+		RR42_RS31320	0.89	-0.4
2,403,273	-		RR42_RS31320	0.89	+1.5
2,403,273	-		RR42_RS31320	0.89	-0.3
2,403,311	+				-0.5
2,403,312	-				-1.9
2,403,352	+				-0.5
2,403,352	+				-0.0
2,403,352	+				-1.2
2,403,353	-				-0.9
2,403,442	+				-0.8
2,403,442	+				-2.3
2,403,443	-				+0.8
2,403,505	+				+0.2
2,403,506	-				-1.5
2,403,525	+				+0.5
2,403,564	+				-0.2
2,403,712	-				+0.8
2,403,849	+				+0.9
2,403,850	-				+0.0
2,403,944	-				-0.1
2,403,944	-				+0.6
2,403,944	-				+0.7
2,403,944	-				-1.2
2,403,944	-				-3.5
2,403,944	-				+0.1
2,404,216	+		RR42_RS31325	0.66	+1.2
2,404,332	-				-0.8
2,404,333	+				-0.3
2,404,334	-				+0.5