Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28885

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
1,832,901	+		RR42_RS28880	0.52	+0.7
1,832,902	-		RR42_RS28880	0.52	+0.1
1,832,902	-		RR42_RS28880	0.52	-1.4
1,833,078	+		RR42_RS28880	0.65	+0.6
1,833,079	-		RR42_RS28880	0.65	-3.1
1,833,248	+		RR42_RS28880	0.78	-1.3
1,833,249	-		RR42_RS28880	0.78	-1.2
1,833,354	-		RR42_RS28880	0.85	-0.5
1,833,393	+		RR42_RS28880	0.88	+0.0
1,833,394	-		RR42_RS28880	0.88	+0.5
1,833,394	-		RR42_RS28880	0.88	+0.0
1,833,394	-		RR42_RS28880	0.88	+0.9
1,833,394	-		RR42_RS28880	0.88	+0.4
1,833,397	+		RR42_RS28880	0.89	-0.0
1,833,398	-		RR42_RS28880	0.89	+0.2
1,833,691	+				+0.3
1,833,703	+				-0.1
1,833,703	+				-1.3
1,833,704	-				-0.3
1,833,746	+				-0.4
1,833,746	+				-0.2
1,833,859	+				-1.5
1,833,859	+				-1.6
1,833,860	-				+0.2
1,834,169	-		RR42_RS28885	0.28	-2.9
1,834,515	+		RR42_RS28885	0.54	-2.5
1,834,515	+		RR42_RS28885	0.54	-1.9
1,834,516	-		RR42_RS28885	0.54	-2.9
1,834,516	-		RR42_RS28885	0.54	-2.9
1,834,516	-		RR42_RS28885	0.54	-1.7
1,834,661	-		RR42_RS28885	0.65	-0.9
1,834,790	+		RR42_RS28885	0.75	-0.3
1,834,790	+		RR42_RS28885	0.75	-1.6
1,834,791	-		RR42_RS28885	0.75	-1.3
1,834,947	+		RR42_RS28885	0.87	-0.9
1,835,149	-				-1.3
1,835,165	+				-0.0
1,835,165	+				-1.2
1,835,166	-				-0.2
1,835,167	-				-1.7
1,835,315	+				+0.7
1,835,316	-				+0.4
1,835,316	-				+0.7
1,835,372	-				+0.8
1,835,372	-				-0.5
1,835,507	+				+0.3
1,835,507	+				-0.2
1,835,507	+				+0.2
1,835,507	+				+0.5
1,835,508	-				-0.5
1,835,508	-				-0.7
1,835,508	-				-0.5
1,835,508	-				+0.4
1,835,698	+				+0.2
1,835,699	-				+1.3
1,835,699	-				-0.2
1,835,838	+		RR42_RS28890	0.15	-0.2
1,835,877	-		RR42_RS28890	0.17	+1.2
1,835,886	+		RR42_RS28890	0.18	+0.5