Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28080
Experiment: R2A with Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
1,659,516 | - | RR42_RS28075 | 0.39 | -1.6 | |
1,659,897 | - | RR42_RS28075 | 0.71 | -0.7 | |
1,659,928 | + | RR42_RS28075 | 0.73 | -0.4 | |
1,660,005 | - | RR42_RS28075 | 0.80 | -0.0 | |
1,660,286 | - | -0.6 | |||
1,660,303 | - | -0.3 | |||
1,660,540 | - | RR42_RS28080 | 0.27 | +1.7 | |
1,660,917 | + | RR42_RS28080 | 0.79 | -1.5 | |
1,660,982 | + | RR42_RS28080 | 0.87 | -1.5 | |
1,660,983 | - | RR42_RS28080 | 0.88 | -0.8 | |
1,661,122 | + | -2.2 | |||
1,661,123 | - | -0.6 | |||
1,661,213 | - | -0.3 | |||
1,661,230 | + | -0.5 | |||
1,661,235 | + | +1.0 | |||
1,661,585 | + | RR42_RS28085 | 0.61 | +0.4 | |
1,661,586 | - | RR42_RS28085 | 0.61 | +0.4 | |
1,662,042 | - | RR42_RS28090 | 0.34 | +0.1 |
Or see this region's nucleotide sequence