Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20025

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
4,324,093	+				+0.3
4,324,093	+				-1.3
4,324,093	+				-0.7
4,324,093	+				-0.4
4,324,093	+				+0.3
4,324,093	+				-1.1
4,324,093	+				-0.2
4,324,093	+				-2.0
4,324,094	-				-0.9
4,324,145	+				+2.6
4,324,145	+				-1.1
4,324,146	-				-0.5
4,324,311	-		RR42_RS20020	0.19	-1.2
4,324,407	+		RR42_RS20020	0.30	-1.1
4,324,408	-		RR42_RS20020	0.30	-1.8
4,324,408	-		RR42_RS20020	0.30	+0.1
4,324,408	-		RR42_RS20020	0.30	-0.4
4,324,408	-		RR42_RS20020	0.30	+1.3
4,324,408	-		RR42_RS20020	0.30	-1.3
4,324,461	+		RR42_RS20020	0.36	+0.2
4,324,462	-		RR42_RS20020	0.36	-1.9
4,324,579	-		RR42_RS20020	0.49	-1.8
4,324,611	+		RR42_RS20020	0.53	-0.1
4,324,611	+		RR42_RS20020	0.53	-0.9
4,324,611	+		RR42_RS20020	0.53	-2.0
4,324,809	+		RR42_RS20020	0.75	+1.4
4,324,809	+		RR42_RS20020	0.75	-0.7
4,325,004	+				-0.3
4,325,004	+				+0.2
4,325,004	+				-1.0
4,325,004	+				-1.1
4,325,004	+				-0.5
4,325,004	+				-0.1
4,325,005	-				+0.5
4,325,026	-				-0.9
4,325,109	-				-0.8
4,325,133	+				+0.3
4,325,134	-				-0.1
4,325,480	+		RR42_RS20025	0.24	+0.2
4,325,480	+		RR42_RS20025	0.24	-0.8
4,325,481	-		RR42_RS20025	0.24	-1.1
4,325,483	+		RR42_RS20025	0.24	+0.7
4,325,483	+		RR42_RS20025	0.24	-1.3
4,325,484	-		RR42_RS20025	0.24	-0.3
4,325,484	-		RR42_RS20025	0.24	+0.8
4,325,513	+		RR42_RS20025	0.26	-0.6
4,325,583	-		RR42_RS20025	0.31	-0.7
4,325,583	-		RR42_RS20025	0.31	-0.3
4,325,669	+		RR42_RS20025	0.36	-0.7
4,325,669	+		RR42_RS20025	0.36	-0.9
4,325,669	+		RR42_RS20025	0.36	+0.4
4,325,669	+		RR42_RS20025	0.36	-0.1
4,325,669	+		RR42_RS20025	0.36	+0.2
4,325,670	-		RR42_RS20025	0.36	-1.0
4,325,670	-		RR42_RS20025	0.36	-0.9
4,325,670	-		RR42_RS20025	0.36	-0.6
4,325,670	-		RR42_RS20025	0.36	-0.5
4,325,670	-		RR42_RS20025	0.36	+1.2
4,325,675	+		RR42_RS20025	0.36	-0.3
4,325,795	+		RR42_RS20025	0.44	-1.2
4,325,801	+		RR42_RS20025	0.44	+0.2
4,325,802	-		RR42_RS20025	0.44	-0.9
4,325,885	+		RR42_RS20025	0.50	-0.4
4,325,886	-		RR42_RS20025	0.50	-0.6
4,325,886	-		RR42_RS20025	0.50	-2.8
4,326,270	-		RR42_RS20025	0.74	-0.8
4,326,324	-		RR42_RS20025	0.77	+1.3
4,326,356	+		RR42_RS20025	0.79	-0.8
4,326,356	+		RR42_RS20025	0.79	-1.1
4,326,356	+		RR42_RS20025	0.79	-0.3
4,326,357	-		RR42_RS20025	0.79	-0.9
4,326,357	-		RR42_RS20025	0.79	-0.5
4,326,357	-		RR42_RS20025	0.79	-0.5
4,326,357	-		RR42_RS20025	0.79	-0.2
4,326,491	+		RR42_RS20025	0.87	-1.7
4,326,508	-		RR42_RS20025	0.88	-0.6
4,326,729	+				+0.4
4,327,082	-		RR42_RS20030	0.16	+1.6
4,327,082	-		RR42_RS20030	0.16	-0.8
4,327,409	-		RR42_RS20030	0.44	-0.3
4,327,409	-		RR42_RS20030	0.44	-0.6
4,327,409	-		RR42_RS20030	0.44	-0.4
4,327,660	+		RR42_RS20030	0.66	+1.3