Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18165

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
3,930,767	-		RR42_RS18160	0.57	-0.9
3,930,797	+		RR42_RS18160	0.59	+0.5
3,930,920	-		RR42_RS18160	0.66	-0.4
3,930,991	+		RR42_RS18160	0.70	-0.8
3,931,171	+		RR42_RS18160	0.80	-0.2
3,931,172	-		RR42_RS18160	0.80	+0.2
3,931,172	-		RR42_RS18160	0.80	-0.1
3,931,411	+				+0.5
3,931,411	+				-0.1
3,931,412	-				+1.0
3,931,412	-				-0.3
3,931,412	-				-0.4
3,931,431	+				+0.3
3,931,431	+				-0.0
3,931,431	+				-3.0
3,931,431	+				+0.1
3,931,432	-				-0.2
3,931,432	-				+0.1
3,931,432	-				+0.3
3,931,432	-				-0.3
3,931,432	-				-0.7
3,931,432	-				-1.2
3,931,581	-				+0.7
3,931,581	-				-0.2
3,931,660	+				+0.1
3,931,661	-				+0.4
3,931,662	+				-0.1
3,931,760	+				-2.9
3,932,116	+		RR42_RS18165	0.17	+2.0
3,932,116	+		RR42_RS18165	0.17	-0.4
3,932,116	+		RR42_RS18165	0.17	-0.0
3,932,117	-		RR42_RS18165	0.17	-1.2
3,932,167	+		RR42_RS18165	0.18	+0.6
3,932,168	-		RR42_RS18165	0.18	-0.0
3,932,677	+		RR42_RS18165	0.33	-1.1
3,932,678	-		RR42_RS18165	0.33	-0.6
3,932,730	+		RR42_RS18165	0.35	-0.5
3,933,670	+		RR42_RS18165	0.63	-0.2
3,933,671	-		RR42_RS18165	0.63	+0.2
3,933,671	-		RR42_RS18165	0.63	-1.3
3,933,894	-		RR42_RS18165	0.70	-0.2
3,933,894	-		RR42_RS18165	0.70	-0.3
3,933,894	-		RR42_RS18165	0.70	+0.2
3,933,894	-		RR42_RS18165	0.70	-0.6
3,933,894	-		RR42_RS18165	0.70	-0.1
3,934,085	-		RR42_RS18165	0.76	-0.5
3,934,085	-		RR42_RS18165	0.76	+0.8
3,934,094	-		RR42_RS18165	0.76	+0.2
3,934,177	+		RR42_RS18165	0.78	-0.2
3,934,177	+		RR42_RS18165	0.78	+0.2
3,934,178	-		RR42_RS18165	0.78	-0.6
3,934,178	-		RR42_RS18165	0.78	+0.4
3,934,752	+				+0.4
3,934,756	-				+0.5
3,935,041	+				-0.5
3,935,232	+		RR42_RS18170	0.19	+1.6
3,935,233	-		RR42_RS18170	0.19	-0.2
3,935,233	-		RR42_RS18170	0.19	-1.1
3,935,406	+		RR42_RS18170	0.32	+0.0
3,935,407	-		RR42_RS18170	0.33	-0.3
3,935,538	+		RR42_RS18170	0.43	-0.3
3,935,538	+		RR42_RS18170	0.43	+0.3
3,935,539	-		RR42_RS18170	0.43	-1.0
3,935,539	-		RR42_RS18170	0.43	-1.5
3,935,539	-		RR42_RS18170	0.43	+0.9
3,935,545	+		RR42_RS18170	0.43	-0.1
3,935,545	+		RR42_RS18170	0.43	+0.7
3,935,545	+		RR42_RS18170	0.43	+0.3
3,935,556	+		RR42_RS18170	0.44	+0.3
3,935,556	+		RR42_RS18170	0.44	+0.7
3,935,556	+		RR42_RS18170	0.44	-1.5
3,935,557	-		RR42_RS18170	0.44	-0.2
3,935,676	+		RR42_RS18170	0.54	-1.0
3,935,677	-		RR42_RS18170	0.54	-0.8
3,935,787	+		RR42_RS18170	0.62	-1.0
3,935,799	-		RR42_RS18170	0.63	-1.1