Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17790

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
3,847,096	+		RR42_RS17780	0.66	+1.8
3,847,096	+		RR42_RS17780	0.66	+0.2
3,847,097	-		RR42_RS17780	0.66	-2.4
3,847,371	+				-1.0
3,847,372	-				-0.3
3,847,438	-				-0.6
3,847,443	-				+2.4
3,847,477	-				+1.1
3,847,477	-				+0.5
3,847,477	-				-0.9
3,847,477	-				-1.2
3,847,477	-				-0.4
3,847,641	-		RR42_RS17785	0.23	+0.5
3,847,681	+		RR42_RS17785	0.34	+0.2
3,847,682	-		RR42_RS17785	0.34	+1.2
3,847,682	-		RR42_RS17785	0.34	-0.3
3,847,682	-		RR42_RS17785	0.34	+0.2
3,847,682	-		RR42_RS17785	0.34	-0.4
3,847,682	-		RR42_RS17785	0.34	-0.2
3,847,801	+		RR42_RS17785	0.64	-0.2
3,847,847	+		RR42_RS17785	0.76	-0.1
3,847,847	+		RR42_RS17785	0.76	-0.9
3,847,847	+		RR42_RS17785	0.76	-0.8
3,847,847	+		RR42_RS17785	0.76	+0.2
3,847,848	-		RR42_RS17785	0.76	+0.2
3,847,848	-		RR42_RS17785	0.76	+0.6
3,847,848	-		RR42_RS17785	0.76	-0.6
3,847,861	+		RR42_RS17785	0.79	+0.1
3,847,861	+		RR42_RS17785	0.79	+0.3
3,847,861	+		RR42_RS17785	0.79	+1.0
3,847,862	-		RR42_RS17785	0.80	+0.4
3,847,862	-		RR42_RS17785	0.80	-0.7
3,847,862	-		RR42_RS17785	0.80	+0.0
3,847,862	-		RR42_RS17785	0.80	+0.6
3,847,862	-		RR42_RS17785	0.80	-0.6
3,847,862	-		RR42_RS17785	0.80	-0.3
3,847,895	-		RR42_RS17785	0.88	-0.1
3,847,895	-		RR42_RS17785	0.88	-0.2
3,847,895	-		RR42_RS17785	0.88	-0.2
3,847,895	-		RR42_RS17785	0.88	+1.7
3,847,895	-		RR42_RS17785	0.88	-0.5
3,847,900	+		RR42_RS17785	0.89	+0.1
3,847,901	-		RR42_RS17785	0.90	+0.3
3,847,921	+				+0.7
3,847,922	-				-0.1
3,847,950	+				+0.7
3,848,270	-		RR42_RS17790	0.13	+0.6
3,848,309	+		RR42_RS17790	0.16	-0.2
3,848,310	-		RR42_RS17790	0.16	+0.4
3,848,310	-		RR42_RS17790	0.16	+0.6
3,848,310	-		RR42_RS17790	0.16	-0.5
3,848,360	-		RR42_RS17790	0.20	+0.6
3,848,360	-		RR42_RS17790	0.20	+0.3
3,848,361	+		RR42_RS17790	0.20	-1.8
3,848,361	+		RR42_RS17790	0.20	+0.2
3,848,361	+		RR42_RS17790	0.20	+0.7
3,848,362	-		RR42_RS17790	0.20	+0.2
3,848,362	-		RR42_RS17790	0.20	+1.1
3,848,363	+		RR42_RS17790	0.20	-0.2
3,848,363	+		RR42_RS17790	0.20	+0.3
3,848,363	+		RR42_RS17790	0.20	-0.2
3,848,363	+		RR42_RS17790	0.20	-0.1
3,848,363	+		RR42_RS17790	0.20	+0.5
3,848,364	-		RR42_RS17790	0.20	-0.4
3,848,364	-		RR42_RS17790	0.20	+0.6
3,848,364	-		RR42_RS17790	0.20	+0.8
3,848,364	-		RR42_RS17790	0.20	+0.7
3,848,364	-		RR42_RS17790	0.20	+1.6
3,848,416	+		RR42_RS17790	0.24	+1.8
3,848,416	+		RR42_RS17790	0.24	-1.0
3,848,455	+		RR42_RS17790	0.27	-0.8
3,848,491	-		RR42_RS17790	0.29	-0.0
3,848,630	+		RR42_RS17790	0.39	+0.1
3,848,675	-		RR42_RS17790	0.42	+0.5
3,848,852	-		RR42_RS17790	0.55	+1.4
3,848,864	-		RR42_RS17790	0.56	-0.0
3,848,864	-		RR42_RS17790	0.56	+0.8
3,849,325	-		RR42_RS17790	0.89	-1.0
3,849,455	-				+0.2
3,849,455	-				+0.1
3,849,457	+				+0.5
3,849,457	+				-0.7
3,849,457	+				+0.4
3,849,458	-				-0.9
3,849,519	+				-0.2
3,849,520	-				+0.0
3,849,524	-				-0.1
3,849,524	-				+1.1
3,849,524	-				-0.4
3,849,766	+		RR42_RS17795	0.19	+1.1
3,849,766	+		RR42_RS17795	0.19	-0.4
3,849,767	-		RR42_RS17795	0.19	+0.5
3,849,767	-		RR42_RS17795	0.19	-0.6
3,849,767	-		RR42_RS17795	0.19	+0.7
3,849,847	+		RR42_RS17795	0.28	-1.0
3,849,931	+		RR42_RS17795	0.38	+0.1
3,849,932	-		RR42_RS17795	0.39	-0.3
3,850,015	+		RR42_RS17795	0.49	+0.2
3,850,016	-		RR42_RS17795	0.49	-0.5
3,850,048	-		RR42_RS17795	0.53	-0.2
3,850,086	-		RR42_RS17795	0.57	+0.7
3,850,105	+		RR42_RS17795	0.59	+0.3
3,850,105	+		RR42_RS17795	0.59	+0.4
3,850,106	-		RR42_RS17795	0.59	-0.6
3,850,106	-		RR42_RS17795	0.59	-0.3
3,850,106	-		RR42_RS17795	0.59	-0.2
3,850,106	-		RR42_RS17795	0.59	+0.8
3,850,180	+		RR42_RS17795	0.68	+1.0
3,850,181	-		RR42_RS17795	0.68	-0.2