Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16655
Experiment: R2A with Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
3,608,298 | + | RR42_RS16645 | 0.74 | -0.4 | |
3,608,340 | + | RR42_RS16645 | 0.78 | -0.3 | |
3,608,340 | + | RR42_RS16645 | 0.78 | -0.0 | |
3,608,341 | - | RR42_RS16645 | 0.78 | +0.1 | |
3,608,341 | - | RR42_RS16645 | 0.78 | +2.6 | |
3,608,341 | - | RR42_RS16645 | 0.78 | -0.6 | |
3,608,540 | + | +0.1 | |||
3,608,548 | - | -0.3 | |||
3,608,548 | - | +0.4 | |||
3,609,816 | + | RR42_RS16655 | 0.89 | -0.2 | |
3,609,816 | + | RR42_RS16655 | 0.89 | +0.3 | |
3,609,816 | + | RR42_RS16655 | 0.89 | -1.1 | |
3,609,817 | - | RR42_RS16655 | 0.89 | -0.9 | |
3,609,817 | - | RR42_RS16655 | 0.89 | -0.6 | |
3,609,817 | - | RR42_RS16655 | 0.89 | +0.2 | |
3,609,817 | - | RR42_RS16655 | 0.89 | -1.0 | |
3,609,817 | - | RR42_RS16655 | 0.89 | -0.5 | |
3,609,858 | + | -1.1 | |||
3,609,858 | + | +0.3 | |||
3,609,983 | + | -1.7 | |||
3,609,984 | - | -0.3 | |||
3,609,984 | - | -0.3 |
Or see this region's nucleotide sequence