Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15805
Experiment: R2A with Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
3,414,657 | - | RR42_RS15795 | 0.87 | -1.9 | |
3,414,699 | - | -1.0 | |||
3,414,817 | - | -0.4 | |||
3,414,884 | - | RR42_RS15800 | 0.14 | -1.8 | |
3,414,902 | - | RR42_RS15800 | 0.16 | -1.3 | |
3,415,148 | - | RR42_RS15800 | 0.44 | -3.5 | |
3,415,506 | - | RR42_RS15800 | 0.84 | +0.8 | |
3,415,560 | + | RR42_RS15800 | 0.90 | -1.1 | |
3,416,348 | - | RR42_RS15805 | 0.61 | -1.6 | |
3,416,866 | - | +2.2 | |||
3,417,074 | + | RR42_RS15810 | 0.28 | +0.4 | |
3,417,335 | + | RR42_RS15810 | 0.54 | -3.0 | |
3,417,519 | + | RR42_RS15810 | 0.73 | -2.5 | |
3,417,564 | + | RR42_RS15810 | 0.77 | -1.4 | |
3,417,565 | - | RR42_RS15810 | 0.77 | -1.6 |
Or see this region's nucleotide sequence