Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13290

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,861,711	+				-1.2
2,861,712	-				-1.7
2,861,812	+				-1.0
2,861,973	-				-0.2
2,862,158	-		RR42_RS13290	0.14	+0.8
2,862,181	-		RR42_RS13290	0.15	-1.6
2,862,403	+		RR42_RS13290	0.24	-0.5
2,862,403	+		RR42_RS13290	0.24	-2.5
2,862,403	+		RR42_RS13290	0.24	+0.4
2,862,404	-		RR42_RS13290	0.24	-3.0
2,862,404	-		RR42_RS13290	0.24	-1.8
2,862,404	-		RR42_RS13290	0.24	-0.6
2,862,404	-		RR42_RS13290	0.24	-0.5
2,862,404	-		RR42_RS13290	0.24	-0.6
2,862,404	-		RR42_RS13290	0.24	-1.2
2,862,404	-		RR42_RS13290	0.24	-0.9
2,862,412	+		RR42_RS13290	0.25	-0.9
2,862,412	+		RR42_RS13290	0.25	-1.6
2,862,412	+		RR42_RS13290	0.25	-0.1
2,862,412	+		RR42_RS13290	0.25	-0.8
2,862,413	-		RR42_RS13290	0.25	-2.0
2,862,413	-		RR42_RS13290	0.25	-1.7
2,862,413	-		RR42_RS13290	0.25	-0.5
2,862,413	-		RR42_RS13290	0.25	-0.1
2,862,574	+		RR42_RS13290	0.31	-0.7
2,862,575	-		RR42_RS13290	0.31	-0.1
2,862,575	-		RR42_RS13290	0.31	-0.9
2,862,616	+		RR42_RS13290	0.33	-0.7
2,862,617	-		RR42_RS13290	0.33	-0.5
2,862,637	+		RR42_RS13290	0.33	-0.5
2,862,637	+		RR42_RS13290	0.33	-0.9
2,862,637	+		RR42_RS13290	0.33	-0.1
2,862,637	+		RR42_RS13290	0.33	-0.8
2,862,638	-		RR42_RS13290	0.34	-1.5
2,862,643	+		RR42_RS13290	0.34	+0.3
2,862,643	+		RR42_RS13290	0.34	-0.2
2,862,686	+		RR42_RS13290	0.35	-0.2
2,862,688	+		RR42_RS13290	0.36	-0.6
2,862,688	+		RR42_RS13290	0.36	-2.7
2,862,689	-		RR42_RS13290	0.36	-0.7
2,862,716	+		RR42_RS13290	0.37	-1.2
2,862,716	+		RR42_RS13290	0.37	+0.3
2,862,716	+		RR42_RS13290	0.37	+0.2
2,862,717	-		RR42_RS13290	0.37	+0.3
2,862,717	-		RR42_RS13290	0.37	-0.1
2,862,793	+		RR42_RS13290	0.40	-1.0
2,862,832	+		RR42_RS13290	0.41	-0.5
2,862,832	+		RR42_RS13290	0.41	+0.3
2,862,832	+		RR42_RS13290	0.41	+0.1
2,862,832	+		RR42_RS13290	0.41	-0.9
2,862,832	+		RR42_RS13290	0.41	+0.0
2,862,832	+		RR42_RS13290	0.41	-1.6
2,862,832	+		RR42_RS13290	0.41	-0.7
2,862,832	+		RR42_RS13290	0.41	-2.7
2,862,833	-		RR42_RS13290	0.41	-0.4
2,862,833	-		RR42_RS13290	0.41	-1.9
2,862,833	-		RR42_RS13290	0.41	-0.7
2,862,833	-		RR42_RS13290	0.41	-1.4
2,862,833	-		RR42_RS13290	0.41	-0.2
2,862,833	-		RR42_RS13290	0.41	+0.8
2,862,833	-		RR42_RS13290	0.41	+0.1
2,862,836	+		RR42_RS13290	0.41	-1.4
2,862,836	+				+0.1
2,862,837	-		RR42_RS13290	0.41	-0.2
2,862,837	-		RR42_RS13290	0.41	-1.0
2,862,837	-		RR42_RS13290	0.41	-1.0
2,862,865	+		RR42_RS13290	0.43	-0.2
2,862,865	+		RR42_RS13290	0.43	-0.4
2,862,865	+		RR42_RS13290	0.43	-0.5
2,862,865	+		RR42_RS13290	0.43	-0.3
2,862,866	-		RR42_RS13290	0.43	-0.7
2,862,866	-		RR42_RS13290	0.43	-0.2
2,862,866	-		RR42_RS13290	0.43	-1.2
2,863,033	+		RR42_RS13290	0.49	-0.4
2,863,261	+		RR42_RS13290	0.58	-0.2
2,863,261	+		RR42_RS13290	0.58	-2.6
2,863,262	-		RR42_RS13290	0.58	+0.2
2,863,262	-		RR42_RS13290	0.58	-1.5
2,863,262	-		RR42_RS13290	0.58	-0.2
2,863,268	+		RR42_RS13290	0.59	-2.1
2,863,462	+		RR42_RS13290	0.66	+0.3
2,863,462	+		RR42_RS13290	0.66	-0.5
2,863,463	-		RR42_RS13290	0.66	-0.4
2,863,463	-		RR42_RS13290	0.66	-0.5
2,863,522	+		RR42_RS13290	0.69	+0.5
2,863,523	-		RR42_RS13290	0.69	-0.6
2,863,523	-		RR42_RS13290	0.69	-1.7
2,863,523	-		RR42_RS13290	0.69	-1.1
2,863,710	-		RR42_RS13290	0.76	+1.0
2,863,931	-		RR42_RS13290	0.85	-0.7
2,864,236	+				-1.3
2,864,368	+				-0.0
2,864,369	-				-0.5
2,864,415	+				-2.3
2,864,529	+				+0.3
2,864,530	-				+0.5
2,864,545	+				-1.6
2,864,581	-				-0.0
2,864,581	-				-1.2
2,864,639	+				-1.4
2,864,640	-				+0.1
2,864,640	-				-0.4
2,864,713	-				-1.0