Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13240

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,850,290	+				-0.2
2,850,291	-				-0.8
2,850,291	-				+0.1
2,850,295	-				-0.4
2,850,407	+				+0.3
2,850,407	+				-0.0
2,850,407	+				+0.1
2,850,408	-				-0.4
2,850,408	-				-0.7
2,850,460	+				-1.4
2,850,461	-				-1.2
2,850,477	+				-1.7
2,850,566	+		RR42_RS13235	0.20	-1.6
2,850,567	-		RR42_RS13235	0.20	-0.7
2,850,593	+		RR42_RS13235	0.24	+0.5
2,850,636	+		RR42_RS13235	0.29	-0.9
2,850,636	+		RR42_RS13235	0.29	-1.0
2,850,636	+		RR42_RS13235	0.29	+0.1
2,850,636	+		RR42_RS13235	0.29	+0.3
2,850,636	+		RR42_RS13235	0.29	-1.3
2,850,636	+		RR42_RS13235	0.29	-0.3
2,850,636	+		RR42_RS13235	0.29	+0.1
2,850,636	+		RR42_RS13235	0.29	-1.2
2,850,637	-		RR42_RS13235	0.29	-0.2
2,850,637	-		RR42_RS13235	0.29	-0.0
2,850,637	-		RR42_RS13235	0.29	+0.1
2,850,637	-		RR42_RS13235	0.29	-0.5
2,850,652	+		RR42_RS13235	0.31	-0.0
2,850,677	+		RR42_RS13235	0.34	-2.1
2,850,677	+		RR42_RS13235	0.34	-0.9
2,850,764	+		RR42_RS13235	0.45	+0.0
2,850,765	-		RR42_RS13235	0.45	-0.7
2,850,894	+		RR42_RS13235	0.62	-1.2
2,850,894	+		RR42_RS13235	0.62	-1.9
2,850,894	+		RR42_RS13235	0.62	-0.3
2,850,895	-		RR42_RS13235	0.62	+0.2
2,850,896	+		RR42_RS13235	0.62	-0.2
2,850,896	+		RR42_RS13235	0.62	-0.8
2,850,897	-		RR42_RS13235	0.62	-0.3
2,850,897	-		RR42_RS13235	0.62	-1.0
2,850,897	-		RR42_RS13235	0.62	-1.1
2,851,019	+		RR42_RS13235	0.77	-1.9
2,851,019	+		RR42_RS13235	0.77	-0.7
2,851,019	+		RR42_RS13235	0.77	-0.9
2,851,019	+		RR42_RS13235	0.77	-0.9
2,851,019	+		RR42_RS13235	0.77	-0.5
2,851,019	+		RR42_RS13235	0.77	+0.7
2,851,020	-		RR42_RS13235	0.78	+0.7
2,851,020	-		RR42_RS13235	0.78	-0.1
2,851,020	-		RR42_RS13235	0.78	+0.6
2,851,020	-		RR42_RS13235	0.78	-0.7
2,851,020	-		RR42_RS13235	0.78	-0.5
2,851,020	-		RR42_RS13235	0.78	-0.1
2,851,495	+		RR42_RS13240	0.29	+0.5
2,851,496	-		RR42_RS13240	0.29	-1.1
2,851,609	+		RR42_RS13240	0.43	-0.9
2,851,610	-		RR42_RS13240	0.43	-0.3
2,851,610	-		RR42_RS13240	0.43	+0.5
2,851,820	+		RR42_RS13240	0.69	-3.0
2,851,821	-		RR42_RS13240	0.69	-1.3
2,851,867	+		RR42_RS13240	0.75	-1.2
2,851,913	+		RR42_RS13240	0.80	-0.4
2,851,998	+				-1.0
2,852,000	+				-1.4
2,852,001	-				-1.1
2,852,011	-				-1.0
2,852,145	+				-1.1
2,852,148	+				-1.7
2,852,149	-				-0.6
2,852,269	+				-0.4
2,852,269	+				-0.4
2,852,269	+				+0.3
2,852,269	+				-2.0
2,852,269	+				-0.9
2,852,269	+				+0.1
2,852,275	+				-1.4
2,852,275	+				+0.1
2,852,477	-		RR42_RS13245	0.20	-1.1
2,852,477	-		RR42_RS13245	0.20	-0.8
2,852,477	-		RR42_RS13245	0.20	-2.2
2,852,605	+		RR42_RS13245	0.32	-1.2
2,852,606	-		RR42_RS13245	0.32	-0.4
2,853,014	+		RR42_RS13245	0.71	-0.7
2,853,014	+		RR42_RS13245	0.71	+0.1
2,853,014	+		RR42_RS13245	0.71	-0.4
2,853,015	-		RR42_RS13245	0.71	+1.1
2,853,015	-		RR42_RS13245	0.71	-1.9
2,853,015	-		RR42_RS13245	0.71	+0.1
2,853,025	+		RR42_RS13245	0.72	-0.4