Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12240

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,630,330	+		RR42_RS12230	0.66	+0.1
2,630,331	-		RR42_RS12230	0.66	-0.4
2,630,331	-		RR42_RS12230	0.66	-0.4
2,630,331	-		RR42_RS12230	0.66	-1.0
2,630,331	-		RR42_RS12230	0.66	-0.8
2,630,363	-		RR42_RS12230	0.69	-0.3
2,630,579	+		RR42_RS12230	0.87	-0.5
2,630,622	-				+0.1
2,630,657	-				-0.7
2,630,733	+				-0.1
2,630,733	+				-0.5
2,630,734	-				-0.1
2,630,773	+				+0.2
2,630,778	+				+0.9
2,630,778	+				-1.2
2,630,821	+				-1.3
2,630,822	-				+0.3
2,630,822	-				-0.9
2,630,823	+				+0.2
2,630,907	-		RR42_RS12235	0.15	+0.8
2,630,907	-		RR42_RS12235	0.15	-0.2
2,631,067	+		RR42_RS12235	0.59	-2.5
2,631,083	+		RR42_RS12235	0.63	-0.1
2,631,171	-		RR42_RS12235	0.87	+0.6
2,631,319	+		RR42_RS12240	0.51	-2.4
2,631,320	-		RR42_RS12240	0.52	-2.8
2,631,484	+				+0.6
2,631,492	+				-1.3
2,631,518	+				-1.0
2,631,735	+		RR42_RS12245	0.11	+0.2
2,631,841	-		RR42_RS12245	0.22	-0.7
2,631,998	-		RR42_RS12245	0.38	+0.3
2,632,090	+		RR42_RS12245	0.48	+0.2
2,632,090	+		RR42_RS12245	0.48	-0.5
2,632,091	-		RR42_RS12245	0.48	+0.1
2,632,092	+		RR42_RS12245	0.48	-0.6
2,632,092	+		RR42_RS12245	0.48	+0.0
2,632,165	+		RR42_RS12245	0.56	-0.1
2,632,228	-		RR42_RS12245	0.63	-1.0
2,632,266	+		RR42_RS12245	0.67	+0.2
2,632,266	+		RR42_RS12245	0.67	-0.3