Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10785

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
2,304,497	+		RR42_RS10775	0.70	-1.1
2,304,498	-		RR42_RS10775	0.70	-0.4
2,304,498	-		RR42_RS10775	0.70	+0.0
2,304,503	+		RR42_RS10775	0.70	-1.0
2,304,504	-		RR42_RS10775	0.70	-0.2
2,304,506	-		RR42_RS10775	0.71	-2.5
2,304,506	-		RR42_RS10775	0.71	-0.2
2,304,548	+		RR42_RS10775	0.74	+0.0
2,304,563	+		RR42_RS10775	0.75	-0.6
2,304,672	-		RR42_RS10775	0.83	-0.5
2,304,838	+				-1.3
2,305,225	+				-1.0
2,305,225	+				-0.9
2,305,225	+				+0.7
2,305,225	+				-0.8
2,305,226	-				+0.5
2,305,226	-				-0.0
2,305,226	-				+0.9
2,305,226	-				-0.1
2,305,273	+				-2.2
2,305,273	+				+0.1
2,305,274	-				-0.7
2,305,274	-				-0.7
2,305,287	+				-2.0
2,305,288	-				-0.2
2,305,288	-				-0.7
2,305,541	+				-0.5
2,305,541	+				-0.6
2,305,541	+				-0.2
2,305,542	-				+0.3
2,305,542	-				-1.0
2,305,595	+		RR42_RS10785	0.14	-0.6
2,305,595	+		RR42_RS10785	0.14	+1.4
2,305,596	-		RR42_RS10785	0.14	+0.5
2,305,760	+		RR42_RS10785	0.25	+0.2
2,305,760	+		RR42_RS10785	0.25	-1.2
2,305,760	+		RR42_RS10785	0.25	+0.3
2,305,760	+		RR42_RS10785	0.25	+0.8
2,305,820	+		RR42_RS10785	0.29	-0.3
2,305,821	-		RR42_RS10785	0.30	+0.5
2,305,880	+		RR42_RS10785	0.34	+0.7
2,306,012	+		RR42_RS10785	0.43	+1.0
2,306,012	+		RR42_RS10785	0.43	-0.4
2,306,012	+		RR42_RS10785	0.43	+0.6
2,306,013	-		RR42_RS10785	0.43	-0.2
2,306,013	-		RR42_RS10785	0.43	-0.6
2,306,013	-		RR42_RS10785	0.43	-0.0
2,306,013	-		RR42_RS10785	0.43	+0.1
2,306,265	-		RR42_RS10785	0.61	-0.3
2,306,468	+		RR42_RS10785	0.75	+0.2
2,306,486	+		RR42_RS10785	0.76	+0.5
2,306,741	+				-0.4
2,306,741	+				-0.1
2,306,741	+				-0.3
2,306,742	-				+0.5
2,306,742	-				-1.6
2,306,742	-				-0.7
2,306,742	-				-0.9
2,306,742	-				-0.6
2,306,826	+				+0.2
2,306,827	-				+0.3
2,306,832	+				+0.0
2,306,832	+				-0.1
2,306,857	-				-0.6
2,306,922	+				+1.2
2,306,922	+				+0.2
2,306,922	+				-0.0
2,306,922	+				-1.3
2,306,922	+				-1.8
2,306,922	+				+1.5
2,306,923	-				-0.3
2,306,923	-				-0.0
2,306,923	-				+0.8
2,306,923	-				-0.1
2,306,923	-				+0.1
2,307,150	+		RR42_RS10790	0.18	+0.2
2,307,150	+		RR42_RS10790	0.18	-1.5
2,307,150	+		RR42_RS10790	0.18	-1.0
2,307,150	+		RR42_RS10790	0.18	-3.0
2,307,151	-		RR42_RS10790	0.18	-1.0
2,307,151	-		RR42_RS10790	0.18	-0.2
2,307,262	-		RR42_RS10790	0.25	+0.0
2,307,494	-		RR42_RS10790	0.40	-0.3
2,307,494	-		RR42_RS10790	0.40	-0.4
2,307,494	-		RR42_RS10790	0.40	+0.5
2,307,720	+		RR42_RS10790	0.55	+0.3
2,307,738	+		RR42_RS10790	0.57	-0.2
2,307,739	-		RR42_RS10790	0.57	+0.4
2,307,750	+		RR42_RS10790	0.57	+0.4
2,307,750	+		RR42_RS10790	0.57	-0.2
2,307,751	-		RR42_RS10790	0.58	-0.1
2,307,783	+		RR42_RS10790	0.60	+0.5
2,307,783	+		RR42_RS10790	0.60	-0.1
2,307,784	-		RR42_RS10790	0.60	+0.1
2,307,784	-		RR42_RS10790	0.60	-0.7
2,307,810	+		RR42_RS10790	0.61	-1.0
2,307,810	+		RR42_RS10790	0.61	-0.2
2,307,810	+		RR42_RS10790	0.61	-1.2
2,307,811	-		RR42_RS10790	0.61	+1.1
2,307,811	-		RR42_RS10790	0.61	+0.3
2,307,814	+		RR42_RS10790	0.62	-1.5
2,307,815	-		RR42_RS10790	0.62	-1.2
2,307,815	-		RR42_RS10790	0.62	-0.5
2,307,815	-		RR42_RS10790	0.62	-1.7