Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS10335
Experiment: R2A with Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | R2A with Dimethyl Sulfoxide 5 vol% |
---|---|---|---|---|---|
remove | |||||
2,211,350 | + | RR42_RS10330 | 0.52 | -1.5 | |
2,211,680 | - | RR42_RS10330 | 0.71 | -0.2 | |
2,212,001 | - | RR42_RS10330 | 0.89 | -0.8 | |
2,212,008 | + | RR42_RS10330 | 0.89 | +0.0 | |
2,212,067 | + | -0.8 | |||
2,212,067 | + | -0.2 | |||
2,212,068 | - | -0.1 | |||
2,212,068 | - | +0.1 | |||
2,212,068 | - | -0.3 | |||
2,212,872 | + | RR42_RS10340 | 0.10 | +0.2 | |
2,213,045 | - | RR42_RS10340 | 0.32 | -0.8 | |
2,213,045 | - | RR42_RS10340 | 0.32 | +0.2 | |
2,213,508 | + | +1.4 | |||
2,213,509 | - | -1.0 | |||
2,213,592 | - | -0.1 | |||
2,213,647 | + | +0.2 | |||
2,213,648 | - | -0.4 | |||
2,213,648 | - | -0.7 | |||
2,213,648 | - | -1.1 | |||
2,213,648 | - | -0.4 |
Or see this region's nucleotide sequence