Experiment: R2A with Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03820 and RR42_RS03825 are separated by 110 nucleotides RR42_RS03825 and RR42_RS03830 are separated by 7 nucleotides RR42_RS03830 and RR42_RS03835 are separated by 6 nucleotides RR42_RS03835 and RR42_RS03840 are separated by 112 nucleotides
RR42_RS03820: RR42_RS03820 - molybdenum cofactor biosynthesis protein MoaA, at 844,243 to 844,485
_RS03820
RR42_RS03825: RR42_RS03825 - ModE family transcriptional regulator, at 844,596 to 845,399
_RS03825
RR42_RS03830: RR42_RS03830 - molybdenum ABC transporter ATPase, at 845,407 to 846,129
_RS03830
RR42_RS03835: RR42_RS03835 - molybdate ABC transporter permease, at 846,136 to 846,807
_RS03835
RR42_RS03840: RR42_RS03840 - molybdate ABC transporter substrate-binding protein, at 846,920 to 847,711
_RS03840
Position (kb) 845
846
847 Strain fitness (log2 ratio) -2
-1
0
1 at 844.462 kb on + strand at 844.463 kb on - strand at 844.463 kb on - strand at 844.463 kb on - strand at 844.463 kb on - strand at 844.463 kb on - strand at 844.540 kb on - strand at 844.540 kb on - strand at 844.545 kb on - strand at 844.545 kb on - strand at 844.600 kb on + strand at 844.601 kb on - strand at 844.601 kb on - strand at 844.732 kb on - strand, within RR42_RS03825 at 844.864 kb on - strand, within RR42_RS03825 at 845.078 kb on - strand, within RR42_RS03825 at 845.436 kb on - strand at 845.599 kb on + strand, within RR42_RS03830 at 845.864 kb on + strand, within RR42_RS03830 at 845.879 kb on + strand, within RR42_RS03830 at 845.880 kb on - strand, within RR42_RS03830 at 845.880 kb on - strand, within RR42_RS03830 at 846.110 kb on - strand at 846.110 kb on - strand at 846.137 kb on + strand at 846.263 kb on + strand, within RR42_RS03835 at 846.263 kb on + strand, within RR42_RS03835 at 846.264 kb on - strand, within RR42_RS03835 at 846.264 kb on - strand, within RR42_RS03835 at 846.437 kb on - strand, within RR42_RS03835 at 846.550 kb on - strand, within RR42_RS03835 at 846.550 kb on - strand, within RR42_RS03835 at 846.624 kb on - strand, within RR42_RS03835 at 846.624 kb on - strand, within RR42_RS03835 at 846.822 kb on + strand at 846.823 kb on - strand at 846.915 kb on - strand at 846.922 kb on - strand at 846.935 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A with Dimethyl Sulfoxide 5 vol% remove 844,462 + +0.5 844,463 - -0.3 844,463 - -0.3 844,463 - -2.3 844,463 - +0.6 844,463 - -0.3 844,540 - -0.2 844,540 - +0.2 844,545 - -0.4 844,545 - +0.3 844,600 + +0.1 844,601 - -0.5 844,601 - -0.6 844,732 - RR42_RS03825 0.17 +0.8 844,864 - RR42_RS03825 0.33 -0.2 845,078 - RR42_RS03825 0.60 +0.4 845,436 - +0.7 845,599 + RR42_RS03830 0.27 +0.1 845,864 + RR42_RS03830 0.63 -0.7 845,879 + RR42_RS03830 0.65 -1.5 845,880 - RR42_RS03830 0.65 -0.9 845,880 - RR42_RS03830 0.65 -0.3 846,110 - -0.4 846,110 - -0.6 846,137 + -0.2 846,263 + RR42_RS03835 0.19 -0.3 846,263 + RR42_RS03835 0.19 +0.5 846,264 - RR42_RS03835 0.19 +1.5 846,264 - RR42_RS03835 0.19 +0.1 846,437 - RR42_RS03835 0.45 -0.3 846,550 - RR42_RS03835 0.62 +1.6 846,550 - RR42_RS03835 0.62 +0.4 846,624 - RR42_RS03835 0.73 -2.1 846,624 - RR42_RS03835 0.73 -0.5 846,822 + +0.1 846,823 - -0.2 846,915 - +0.1 846,922 - -0.1 846,935 + -0.4
Or see this region's nucleotide sequence