Experiment: ALP with Nickel (II) chloride 3.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2287 and Dsui_2288 are separated by 112 nucleotides Dsui_2288 and Dsui_2289 are separated by 14 nucleotides Dsui_2289 and Dsui_2290 overlap by 8 nucleotides Dsui_2290 and Dsui_2291 overlap by 4 nucleotides
Dsui_2287: Dsui_2287 - aminopeptidase N, at 2,439,993 to 2,442,602
_2287
Dsui_2288: Dsui_2288 - hypothetical protein, at 2,442,715 to 2,443,389
_2288
Dsui_2289: Dsui_2289 - qaraquat-inducible protein B, at 2,443,404 to 2,444,975
_2289
Dsui_2290: Dsui_2290 - putative paraquat-inducible protein A, at 2,444,968 to 2,445,633
_2290
Dsui_2291: Dsui_2291 - putative paraquat-inducible protein A, at 2,445,630 to 2,446,265
_2291
Position (kb)
2443
2444
2445 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.422 kb on + strand at 2442.453 kb on - strand at 2442.468 kb on + strand at 2442.513 kb on + strand at 2442.521 kb on - strand at 2442.528 kb on + strand at 2442.558 kb on - strand at 2442.911 kb on + strand at 2442.978 kb on + strand, within Dsui_2288 at 2443.131 kb on + strand at 2443.179 kb on + strand, within Dsui_2288 at 2443.408 kb on - strand at 2443.568 kb on - strand, within Dsui_2289 at 2443.596 kb on - strand, within Dsui_2289 at 2443.646 kb on + strand at 2443.782 kb on + strand, within Dsui_2289 at 2443.804 kb on + strand at 2443.805 kb on - strand, within Dsui_2289 at 2443.870 kb on + strand, within Dsui_2289 at 2443.918 kb on + strand, within Dsui_2289 at 2444.007 kb on - strand, within Dsui_2289 at 2444.055 kb on - strand, within Dsui_2289 at 2444.059 kb on - strand at 2444.122 kb on + strand, within Dsui_2289 at 2444.122 kb on + strand at 2444.233 kb on - strand, within Dsui_2289 at 2444.233 kb on - strand, within Dsui_2289 at 2444.233 kb on - strand, within Dsui_2289 at 2444.255 kb on + strand at 2444.836 kb on + strand at 2444.875 kb on - strand at 2444.914 kb on - strand at 2445.119 kb on - strand, within Dsui_2290 at 2445.148 kb on - strand, within Dsui_2290 at 2445.166 kb on - strand, within Dsui_2290 at 2445.189 kb on + strand at 2445.197 kb on - strand, within Dsui_2290 at 2445.221 kb on + strand at 2445.287 kb on - strand, within Dsui_2290 at 2445.323 kb on - strand, within Dsui_2290 at 2445.356 kb on - strand at 2445.829 kb on - strand, within Dsui_2291 at 2445.923 kb on - strand, within Dsui_2291 at 2445.975 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 3.5 mM remove 2,442,422 + -0.1 2,442,422 + +0.9 2,442,422 + -2.1 2,442,453 - -0.1 2,442,468 + +2.7 2,442,513 + -0.2 2,442,521 - +0.9 2,442,528 + -2.6 2,442,558 - -0.7 2,442,911 + -0.1 2,442,978 + Dsui_2288 0.39 -0.1 2,443,131 + +0.9 2,443,179 + Dsui_2288 0.69 -0.7 2,443,408 - +0.9 2,443,568 - Dsui_2289 0.10 -1.7 2,443,596 - Dsui_2289 0.12 +0.9 2,443,646 + +0.9 2,443,782 + Dsui_2289 0.24 +0.9 2,443,804 + +0.9 2,443,805 - Dsui_2289 0.26 -0.1 2,443,870 + Dsui_2289 0.30 -2.3 2,443,918 + Dsui_2289 0.33 -0.7 2,444,007 - Dsui_2289 0.38 +0.9 2,444,055 - Dsui_2289 0.41 -1.1 2,444,059 - +0.9 2,444,122 + Dsui_2289 0.46 -0.1 2,444,122 + +0.9 2,444,233 - Dsui_2289 0.53 +0.9 2,444,233 - Dsui_2289 0.53 +0.9 2,444,233 - Dsui_2289 0.53 -1.1 2,444,255 + -0.1 2,444,836 + -0.1 2,444,875 - +0.9 2,444,914 - +0.9 2,445,119 - Dsui_2290 0.23 -1.5 2,445,148 - Dsui_2290 0.27 -0.7 2,445,166 - Dsui_2290 0.30 -2.5 2,445,189 + +0.9 2,445,197 - Dsui_2290 0.34 -0.1 2,445,221 + -0.1 2,445,287 - Dsui_2290 0.48 -0.7 2,445,323 - Dsui_2290 0.53 -0.7 2,445,356 - -0.1 2,445,829 - Dsui_2291 0.31 +0.9 2,445,923 - Dsui_2291 0.46 -0.1 2,445,975 + -0.1
Or see this region's nucleotide sequence