Experiment: ALP with Nickel (II) chloride 3.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2094 and Dsui_2095 are separated by 72 nucleotides Dsui_2095 and Dsui_2096 are separated by 286 nucleotides
Dsui_2094: Dsui_2094 - putative autotransporter protein, at 2,215,649 to 2,219,413
_2094
Dsui_2095: Dsui_2095 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,219,486 to 2,220,172
_2095
Dsui_2096: Dsui_2096 - methyl-accepting chemotaxis protein, at 2,220,459 to 2,222,066
_2096
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-2
-1
0
1 at 2218.486 kb on + strand, within Dsui_2094 at 2218.868 kb on + strand, within Dsui_2094 at 2218.876 kb on - strand at 2219.023 kb on - strand at 2219.294 kb on + strand at 2219.491 kb on + strand at 2219.491 kb on + strand at 2219.533 kb on + strand at 2219.671 kb on - strand at 2219.778 kb on + strand, within Dsui_2095 at 2219.782 kb on + strand, within Dsui_2095 at 2219.946 kb on + strand at 2220.064 kb on - strand at 2220.161 kb on + strand at 2220.211 kb on + strand at 2220.316 kb on - strand at 2220.431 kb on - strand at 2220.451 kb on - strand at 2220.484 kb on + strand at 2220.676 kb on - strand, within Dsui_2096 at 2220.712 kb on + strand, within Dsui_2096 at 2220.734 kb on + strand, within Dsui_2096 at 2220.741 kb on + strand at 2220.772 kb on + strand, within Dsui_2096 at 2220.869 kb on + strand, within Dsui_2096 at 2220.931 kb on - strand, within Dsui_2096 at 2220.987 kb on + strand, within Dsui_2096 at 2221.080 kb on + strand, within Dsui_2096 at 2221.133 kb on + strand, within Dsui_2096 at 2221.165 kb on + strand, within Dsui_2096
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 3.5 mM remove 2,218,486 + Dsui_2094 0.75 -0.5 2,218,868 + Dsui_2094 0.85 -1.3 2,218,876 - +0.0 2,219,023 - +1.0 2,219,294 + +1.0 2,219,491 + +1.0 2,219,491 + +1.0 2,219,533 + -1.3 2,219,671 - -0.5 2,219,778 + Dsui_2095 0.43 -1.8 2,219,782 + Dsui_2095 0.43 -1.0 2,219,946 + +1.0 2,220,064 - +1.0 2,220,161 + +1.0 2,220,211 + -1.4 2,220,316 - +1.0 2,220,431 - +0.0 2,220,451 - +1.0 2,220,484 + +0.0 2,220,676 - Dsui_2096 0.13 +0.0 2,220,712 + Dsui_2096 0.16 +1.0 2,220,734 + Dsui_2096 0.17 -0.5 2,220,741 + +0.0 2,220,772 + Dsui_2096 0.19 -2.3 2,220,869 + Dsui_2096 0.25 +1.0 2,220,931 - Dsui_2096 0.29 +0.0 2,220,987 + Dsui_2096 0.33 -1.0 2,221,080 + Dsui_2096 0.39 -1.0 2,221,133 + Dsui_2096 0.42 -1.0 2,221,165 + Dsui_2096 0.44 +0.0
Or see this region's nucleotide sequence