Strain Fitness in Dechlorosoma suillum PS around Dsui_0665

Experiment: ALP with Nickel (II) chloride 3.5 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0664 and Dsui_0665 are separated by 78 nucleotidesDsui_0665 and Dsui_0666 are separated by 145 nucleotides Dsui_0664: Dsui_0664 - glutamate-1-semialdehyde-2,1-aminomutase, at 660,727 to 662,010 _0664 Dsui_0665: Dsui_0665 - polyphosphate kinase 2, PA0141 family, at 662,089 to 663,288 _0665 Dsui_0666: Dsui_0666 - Na+/proline symporter, at 663,434 to 664,936 _0666 Position (kb) 662 663 664Strain fitness (log2 ratio) -1 0 1at 662.104 kb on + strandat 662.225 kb on + strand, within Dsui_0665at 662.225 kb on + strandat 662.226 kb on - strand, within Dsui_0665at 662.233 kb on - strand, within Dsui_0665at 662.233 kb on - strand, within Dsui_0665at 662.329 kb on - strand, within Dsui_0665at 662.366 kb on + strand, within Dsui_0665at 662.454 kb on + strand, within Dsui_0665at 662.454 kb on + strand, within Dsui_0665at 662.454 kb on + strand, within Dsui_0665at 662.568 kb on + strand, within Dsui_0665at 662.668 kb on - strand, within Dsui_0665at 662.708 kb on + strand, within Dsui_0665at 662.716 kb on - strand, within Dsui_0665at 662.751 kb on - strand, within Dsui_0665at 662.792 kb on - strand, within Dsui_0665at 663.037 kb on - strand, within Dsui_0665at 663.048 kb on + strand, within Dsui_0665at 663.048 kb on + strand, within Dsui_0665at 663.056 kb on - strand, within Dsui_0665at 663.081 kb on + strand, within Dsui_0665at 663.135 kb on + strand, within Dsui_0665at 663.161 kb on - strand, within Dsui_0665at 663.197 kb on + strandat 663.620 kb on + strandat 663.686 kb on - strand, within Dsui_0666at 663.941 kb on + strand, within Dsui_0666at 663.959 kb on - strand, within Dsui_0666at 664.037 kb on - strand, within Dsui_0666at 664.109 kb on + strand, within Dsui_0666at 664.217 kb on - strand, within Dsui_0666at 664.219 kb on + strand, within Dsui_0666

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 3.5 mM
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662,104 + -1.3
662,225 + Dsui_0665 0.11 +0.7
662,225 + +0.7
662,226 - Dsui_0665 0.11 -0.1
662,233 - Dsui_0665 0.12 +0.1
662,233 - Dsui_0665 0.12 -0.4
662,329 - Dsui_0665 0.20 -0.4
662,366 + Dsui_0665 0.23 +0.7
662,454 + Dsui_0665 0.30 -1.1
662,454 + Dsui_0665 0.30 -0.9
662,454 + Dsui_0665 0.30 +1.4
662,568 + Dsui_0665 0.40 -0.3
662,668 - Dsui_0665 0.48 +0.0
662,708 + Dsui_0665 0.52 +0.7
662,716 - Dsui_0665 0.52 -0.1
662,751 - Dsui_0665 0.55 +0.5
662,792 - Dsui_0665 0.59 -0.0
663,037 - Dsui_0665 0.79 -0.4
663,048 + Dsui_0665 0.80 +0.7
663,048 + Dsui_0665 0.80 -0.9
663,056 - Dsui_0665 0.81 -0.6
663,081 + Dsui_0665 0.83 +0.7
663,135 + Dsui_0665 0.87 -1.7
663,161 - Dsui_0665 0.89 -0.4
663,197 + -1.3
663,620 + +0.7
663,686 - Dsui_0666 0.17 +0.3
663,941 + Dsui_0666 0.34 +0.7
663,959 - Dsui_0666 0.35 -0.1
664,037 - Dsui_0666 0.40 +0.5
664,109 + Dsui_0666 0.45 -1.7
664,217 - Dsui_0666 0.52 +0.4
664,219 + Dsui_0666 0.52 -0.9

Or see this region's nucleotide sequence