Experiment: ALP with Nickel (II) chloride 3.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0642 and Dsui_0643 are separated by 236 nucleotides Dsui_0643 and Dsui_0644 are separated by 107 nucleotides
Dsui_0642: Dsui_0642 - adenosylhomocysteinase, at 634,267 to 635,667
_0642
Dsui_0643: Dsui_0643 - HD-GYP domain-containing protein, at 635,904 to 637,133
_0643
Dsui_0644: Dsui_0644 - acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 637,241 to 638,917
_0644
Position (kb) 635
636
637
638 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 635.833 kb on + strand at 635.833 kb on + strand at 635.901 kb on + strand at 635.902 kb on + strand at 635.990 kb on + strand at 635.998 kb on - strand at 636.003 kb on - strand at 636.025 kb on + strand at 636.055 kb on + strand, within Dsui_0643 at 636.063 kb on - strand, within Dsui_0643 at 636.064 kb on - strand, within Dsui_0643 at 636.100 kb on - strand, within Dsui_0643 at 636.103 kb on + strand, within Dsui_0643 at 636.171 kb on + strand, within Dsui_0643 at 636.243 kb on - strand, within Dsui_0643 at 636.247 kb on - strand, within Dsui_0643 at 636.311 kb on - strand, within Dsui_0643 at 636.331 kb on + strand, within Dsui_0643 at 636.430 kb on + strand, within Dsui_0643 at 636.457 kb on - strand, within Dsui_0643 at 636.523 kb on - strand, within Dsui_0643 at 636.623 kb on + strand at 636.743 kb on - strand, within Dsui_0643 at 636.748 kb on + strand, within Dsui_0643 at 636.844 kb on + strand, within Dsui_0643 at 636.844 kb on + strand, within Dsui_0643 at 636.860 kb on + strand, within Dsui_0643 at 636.862 kb on - strand, within Dsui_0643 at 636.958 kb on + strand, within Dsui_0643 at 637.024 kb on - strand at 637.080 kb on - strand at 637.080 kb on - strand at 637.104 kb on + strand at 637.138 kb on - strand at 637.142 kb on + strand at 637.183 kb on - strand at 637.218 kb on + strand at 637.226 kb on - strand at 637.239 kb on + strand at 637.239 kb on + strand at 637.247 kb on - strand at 637.252 kb on - strand at 637.316 kb on + strand at 637.316 kb on + strand at 637.324 kb on - strand at 637.324 kb on - strand at 637.324 kb on - strand at 637.374 kb on - strand at 637.454 kb on + strand, within Dsui_0644 at 637.572 kb on + strand, within Dsui_0644 at 637.580 kb on - strand, within Dsui_0644 at 637.580 kb on - strand, within Dsui_0644 at 637.656 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.662 kb on + strand, within Dsui_0644 at 637.708 kb on - strand, within Dsui_0644 at 637.808 kb on + strand, within Dsui_0644 at 637.899 kb on - strand, within Dsui_0644 at 637.965 kb on + strand, within Dsui_0644 at 637.973 kb on - strand, within Dsui_0644 at 637.978 kb on - strand, within Dsui_0644 at 638.019 kb on - strand, within Dsui_0644 at 638.036 kb on + strand, within Dsui_0644 at 638.037 kb on - strand, within Dsui_0644 at 638.128 kb on + strand, within Dsui_0644 at 638.133 kb on + strand, within Dsui_0644
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 3.5 mM remove 635,833 + -0.9 635,833 + +1.2 635,901 + +0.7 635,902 + +0.7 635,990 + +0.7 635,998 - +0.5 636,003 - -1.7 636,025 + +0.7 636,055 + Dsui_0643 0.12 +0.7 636,063 - Dsui_0643 0.13 -1.3 636,064 - Dsui_0643 0.13 -1.4 636,100 - Dsui_0643 0.16 +0.2 636,103 + Dsui_0643 0.16 +0.7 636,171 + Dsui_0643 0.22 +0.7 636,243 - Dsui_0643 0.28 -0.7 636,247 - Dsui_0643 0.28 -0.8 636,311 - Dsui_0643 0.33 -0.9 636,331 + Dsui_0643 0.35 +0.7 636,430 + Dsui_0643 0.43 -0.3 636,457 - Dsui_0643 0.45 -2.5 636,523 - Dsui_0643 0.50 -0.9 636,623 + +0.7 636,743 - Dsui_0643 0.68 -0.4 636,748 + Dsui_0643 0.69 -1.7 636,844 + Dsui_0643 0.76 -0.9 636,844 + Dsui_0643 0.76 +0.7 636,860 + Dsui_0643 0.78 -1.3 636,862 - Dsui_0643 0.78 -0.9 636,958 + Dsui_0643 0.86 -0.3 637,024 - -0.9 637,080 - -1.4 637,080 - -6.4 637,104 + +0.7 637,138 - +0.7 637,142 + -0.3 637,183 - +0.7 637,218 + +0.7 637,226 - -1.9 637,239 + +0.7 637,239 + -0.9 637,247 - +0.7 637,252 - +0.7 637,316 + -0.3 637,316 + +0.7 637,324 - -0.9 637,324 - +0.7 637,324 - -1.8 637,374 - -0.3 637,454 + Dsui_0644 0.13 +0.7 637,572 + Dsui_0644 0.20 -0.9 637,580 - Dsui_0644 0.20 -0.3 637,580 - Dsui_0644 0.20 +0.7 637,656 + Dsui_0644 0.25 -2.5 637,662 + Dsui_0644 0.25 -0.3 637,662 + Dsui_0644 0.25 -0.3 637,662 + Dsui_0644 0.25 +0.7 637,708 - Dsui_0644 0.28 -1.9 637,808 + Dsui_0644 0.34 +0.7 637,899 - Dsui_0644 0.39 +0.7 637,965 + Dsui_0644 0.43 -0.3 637,973 - Dsui_0644 0.44 -0.3 637,978 - Dsui_0644 0.44 -2.8 638,019 - Dsui_0644 0.46 -2.1 638,036 + Dsui_0644 0.47 +0.7 638,037 - Dsui_0644 0.47 -2.5 638,128 + Dsui_0644 0.53 +0.7 638,133 + Dsui_0644 0.53 -2.1
Or see this region's nucleotide sequence