Experiment: ALP with Nickel (II) chloride 3.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0428 and Dsui_0429 are separated by 286 nucleotides Dsui_0429 and Dsui_0430 are separated by 142 nucleotides
Dsui_0428: Dsui_0428 - methyl-accepting chemotaxis protein, at 432,673 to 434,526
_0428
Dsui_0429: Dsui_0429 - cystathionine beta-lyase/cystathionine gamma-synthase, at 434,813 to 435,961
_0429
Dsui_0430: Dsui_0430 - ABC-type branched-chain amino acid transport system, periplasmic component, at 436,104 to 437,216
_0430
Position (kb) 434
435
436 Strain fitness (log2 ratio) -2
-1
0
1 at 433.831 kb on - strand, within Dsui_0428 at 433.910 kb on + strand, within Dsui_0428 at 434.036 kb on - strand, within Dsui_0428 at 434.037 kb on - strand, within Dsui_0428 at 434.096 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.125 kb on + strand, within Dsui_0428 at 434.202 kb on + strand, within Dsui_0428 at 434.310 kb on + strand at 434.329 kb on - strand, within Dsui_0428 at 434.381 kb on - strand at 434.686 kb on + strand at 434.823 kb on + strand at 434.823 kb on + strand at 435.011 kb on - strand, within Dsui_0429 at 435.388 kb on + strand at 435.409 kb on - strand, within Dsui_0429 at 435.409 kb on - strand at 435.524 kb on + strand, within Dsui_0429 at 435.621 kb on - strand, within Dsui_0429 at 435.641 kb on - strand, within Dsui_0429 at 435.641 kb on - strand, within Dsui_0429 at 435.773 kb on + strand, within Dsui_0429 at 435.847 kb on - strand at 436.061 kb on - strand at 436.061 kb on - strand at 436.100 kb on - strand at 436.129 kb on + strand at 436.247 kb on + strand, within Dsui_0430 at 436.286 kb on + strand, within Dsui_0430 at 436.327 kb on + strand, within Dsui_0430 at 436.347 kb on - strand, within Dsui_0430 at 436.404 kb on + strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.474 kb on - strand, within Dsui_0430 at 436.584 kb on + strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.720 kb on - strand, within Dsui_0430 at 436.744 kb on - strand, within Dsui_0430 at 436.832 kb on + strand, within Dsui_0430 at 436.906 kb on - strand at 436.942 kb on - strand, within Dsui_0430
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Nickel (II) chloride 3.5 mM remove 433,831 - Dsui_0428 0.62 -1.2 433,910 + Dsui_0428 0.67 -1.0 434,036 - Dsui_0428 0.74 -1.2 434,037 - Dsui_0428 0.74 -0.5 434,096 + Dsui_0428 0.77 -0.4 434,125 + Dsui_0428 0.78 +0.6 434,125 + Dsui_0428 0.78 -2.4 434,202 + Dsui_0428 0.82 -0.4 434,310 + +0.6 434,329 - Dsui_0428 0.89 -0.6 434,381 - -1.6 434,686 + -0.4 434,823 + +0.6 434,823 + +0.6 435,011 - Dsui_0429 0.17 -2.0 435,388 + +0.6 435,409 - Dsui_0429 0.52 +0.3 435,409 - +0.6 435,524 + Dsui_0429 0.62 -0.4 435,621 - Dsui_0429 0.70 +0.6 435,641 - Dsui_0429 0.72 +1.6 435,641 - Dsui_0429 0.72 -0.5 435,773 + Dsui_0429 0.84 -1.0 435,847 - +0.6 436,061 - -2.0 436,061 - +0.6 436,100 - +0.6 436,129 + -0.4 436,247 + Dsui_0430 0.13 -1.9 436,286 + Dsui_0430 0.16 -1.8 436,327 + Dsui_0430 0.20 -1.1 436,347 - Dsui_0430 0.22 +0.6 436,404 + Dsui_0430 0.27 -1.5 436,474 - Dsui_0430 0.33 -1.0 436,474 - Dsui_0430 0.33 -1.4 436,584 + Dsui_0430 0.43 -1.4 436,720 - Dsui_0430 0.55 -0.4 436,720 - Dsui_0430 0.55 -1.0 436,744 - Dsui_0430 0.58 -0.4 436,832 + Dsui_0430 0.65 -1.7 436,906 - +0.6 436,942 - Dsui_0430 0.75 +0.3
Or see this region's nucleotide sequence