Experiment: D-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS01060 and BWI76_RS01065 are separated by 134 nucleotides BWI76_RS01065 and BWI76_RS01070 are separated by 341 nucleotides
BWI76_RS01060: BWI76_RS01060 - guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase, at 216,812 to 218,311
_RS01060
BWI76_RS01065: BWI76_RS01065 - ATP-dependent RNA helicase RhlB, at 218,446 to 219,711
_RS01065
BWI76_RS01070: BWI76_RS01070 - thiol reductase thioredoxin, at 220,053 to 220,382
_RS01070
Position (kb) 218
219
220 Strain fitness (log2 ratio) -2
-1
0
1 at 217.717 kb on + strand, within BWI76_RS01060 at 217.720 kb on - strand, within BWI76_RS01060 at 217.835 kb on - strand, within BWI76_RS01060 at 217.993 kb on - strand, within BWI76_RS01060 at 218.297 kb on - strand at 218.299 kb on + strand at 218.321 kb on - strand at 218.332 kb on + strand at 218.340 kb on - strand at 218.448 kb on + strand at 218.451 kb on - strand at 218.533 kb on - strand at 218.533 kb on - strand at 218.965 kb on + strand, within BWI76_RS01065 at 218.966 kb on + strand, within BWI76_RS01065 at 219.065 kb on + strand, within BWI76_RS01065 at 219.124 kb on - strand, within BWI76_RS01065 at 219.124 kb on - strand, within BWI76_RS01065 at 219.254 kb on - strand, within BWI76_RS01065 at 219.323 kb on + strand, within BWI76_RS01065 at 219.377 kb on - strand, within BWI76_RS01065 at 219.742 kb on - strand at 219.863 kb on + strand at 219.901 kb on + strand at 220.103 kb on + strand, within BWI76_RS01070 at 220.103 kb on + strand, within BWI76_RS01070 at 220.103 kb on + strand, within BWI76_RS01070 at 220.111 kb on - strand, within BWI76_RS01070 at 220.125 kb on - strand, within BWI76_RS01070 at 220.125 kb on - strand, within BWI76_RS01070 at 220.155 kb on - strand, within BWI76_RS01070 at 220.226 kb on + strand, within BWI76_RS01070 at 220.337 kb on + strand, within BWI76_RS01070 at 220.344 kb on + strand, within BWI76_RS01070 at 220.345 kb on - strand, within BWI76_RS01070 at 220.345 kb on - strand, within BWI76_RS01070 at 220.414 kb on - strand at 220.433 kb on - strand at 220.448 kb on + strand at 220.504 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Lactate (C) remove 217,717 + BWI76_RS01060 0.60 -1.6 217,720 - BWI76_RS01060 0.61 -1.3 217,835 - BWI76_RS01060 0.68 -0.5 217,993 - BWI76_RS01060 0.79 -1.1 218,297 - -1.4 218,299 + -1.6 218,321 - -0.4 218,332 + -2.5 218,340 - -0.7 218,448 + -2.2 218,451 - -0.1 218,533 - -0.8 218,533 - -0.6 218,965 + BWI76_RS01065 0.41 -0.2 218,966 + BWI76_RS01065 0.41 -2.0 219,065 + BWI76_RS01065 0.49 -0.7 219,124 - BWI76_RS01065 0.54 -0.7 219,124 - BWI76_RS01065 0.54 -1.3 219,254 - BWI76_RS01065 0.64 -1.9 219,323 + BWI76_RS01065 0.69 -0.1 219,377 - BWI76_RS01065 0.74 -1.4 219,742 - +0.3 219,863 + -0.9 219,901 + -0.5 220,103 + BWI76_RS01070 0.15 -1.2 220,103 + BWI76_RS01070 0.15 -2.0 220,103 + BWI76_RS01070 0.15 -1.2 220,111 - BWI76_RS01070 0.18 -1.3 220,125 - BWI76_RS01070 0.22 -1.3 220,125 - BWI76_RS01070 0.22 -1.0 220,155 - BWI76_RS01070 0.31 -0.1 220,226 + BWI76_RS01070 0.52 +0.1 220,337 + BWI76_RS01070 0.86 +1.7 220,344 + BWI76_RS01070 0.88 -1.0 220,345 - BWI76_RS01070 0.88 -0.6 220,345 - BWI76_RS01070 0.88 -1.5 220,414 - -1.4 220,433 - -1.0 220,448 + -1.9 220,504 + -0.8
Or see this region's nucleotide sequence