Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23055 and AO353_23060 overlap by 4 nucleotides AO353_23060 and AO353_23065 are separated by 34 nucleotides
AO353_23055: AO353_23055 - methylmalonyl-CoA decarboxylase, at 5,060,170 to 5,060,970
_23055
AO353_23060: AO353_23060 - CaiB/baiF CoA-transferase, at 5,060,967 to 5,062,223
_23060
AO353_23065: AO353_23065 - MFS transporter, at 5,062,258 to 5,063,580
_23065
Position (kb)
5060
5061
5062
5063 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5060.016 kb on - strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.033 kb on + strand at 5060.033 kb on + strand at 5060.123 kb on + strand at 5060.124 kb on - strand at 5060.134 kb on + strand at 5060.135 kb on - strand at 5060.135 kb on - strand at 5060.425 kb on + strand, within AO353_23055 at 5060.425 kb on + strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.538 kb on - strand, within AO353_23055 at 5060.797 kb on + strand, within AO353_23055 at 5060.811 kb on + strand, within AO353_23055 at 5060.811 kb on + strand, within AO353_23055 at 5060.811 kb on + strand, within AO353_23055 at 5060.811 kb on + strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5060.812 kb on - strand, within AO353_23055 at 5061.278 kb on + strand, within AO353_23060 at 5061.278 kb on + strand, within AO353_23060 at 5061.278 kb on + strand, within AO353_23060 at 5061.365 kb on + strand, within AO353_23060 at 5061.365 kb on + strand, within AO353_23060 at 5061.365 kb on + strand, within AO353_23060 at 5061.365 kb on + strand, within AO353_23060 at 5061.366 kb on - strand, within AO353_23060 at 5061.366 kb on - strand, within AO353_23060 at 5061.456 kb on + strand, within AO353_23060 at 5061.457 kb on - strand, within AO353_23060 at 5061.457 kb on - strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.582 kb on + strand, within AO353_23060 at 5061.583 kb on - strand, within AO353_23060 at 5061.583 kb on - strand, within AO353_23060 at 5061.583 kb on - strand, within AO353_23060 at 5061.583 kb on - strand, within AO353_23060 at 5061.586 kb on + strand, within AO353_23060 at 5061.586 kb on + strand, within AO353_23060 at 5061.793 kb on + strand at 5061.793 kb on + strand, within AO353_23060 at 5061.794 kb on - strand, within AO353_23060 at 5061.904 kb on + strand, within AO353_23060 at 5061.904 kb on + strand, within AO353_23060 at 5061.905 kb on - strand, within AO353_23060 at 5061.905 kb on - strand, within AO353_23060 at 5061.905 kb on - strand, within AO353_23060 at 5061.905 kb on - strand, within AO353_23060 at 5062.031 kb on + strand, within AO353_23060 at 5062.032 kb on - strand, within AO353_23060 at 5062.032 kb on - strand, within AO353_23060 at 5062.041 kb on - strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.051 kb on + strand, within AO353_23060 at 5062.052 kb on - strand, within AO353_23060 at 5062.052 kb on - strand, within AO353_23060 at 5062.052 kb on - strand, within AO353_23060 at 5062.052 kb on - strand at 5062.052 kb on - strand, within AO353_23060 at 5062.052 kb on - strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.054 kb on + strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.055 kb on - strand, within AO353_23060 at 5062.223 kb on + strand at 5062.223 kb on + strand at 5062.259 kb on + strand at 5062.565 kb on + strand, within AO353_23065 at 5062.566 kb on - strand, within AO353_23065 at 5062.566 kb on - strand, within AO353_23065 at 5062.566 kb on - strand, within AO353_23065 at 5062.566 kb on - strand, within AO353_23065 at 5062.566 kb on - strand, within AO353_23065 at 5062.616 kb on + strand, within AO353_23065 at 5062.616 kb on + strand, within AO353_23065 at 5062.617 kb on - strand, within AO353_23065 at 5062.617 kb on - strand, within AO353_23065 at 5062.617 kb on - strand, within AO353_23065 at 5062.684 kb on - strand, within AO353_23065 at 5062.788 kb on - strand, within AO353_23065 at 5062.788 kb on - strand, within AO353_23065 at 5062.973 kb on + strand, within AO353_23065 at 5062.973 kb on + strand, within AO353_23065 at 5062.974 kb on - strand, within AO353_23065 at 5062.974 kb on - strand, within AO353_23065 at 5062.997 kb on - strand, within AO353_23065 at 5063.027 kb on + strand, within AO353_23065 at 5063.027 kb on + strand, within AO353_23065 at 5063.027 kb on + strand, within AO353_23065 at 5063.027 kb on + strand, within AO353_23065 at 5063.027 kb on + strand, within AO353_23065 at 5063.045 kb on + strand, within AO353_23065 at 5063.045 kb on + strand, within AO353_23065 at 5063.045 kb on + strand, within AO353_23065 at 5063.045 kb on + strand, within AO353_23065 at 5063.046 kb on - strand, within AO353_23065 at 5063.046 kb on - strand, within AO353_23065 at 5063.046 kb on - strand, within AO353_23065 at 5063.046 kb on - strand, within AO353_23065 at 5063.078 kb on + strand, within AO353_23065 at 5063.078 kb on + strand, within AO353_23065 at 5063.078 kb on + strand, within AO353_23065 at 5063.079 kb on - strand, within AO353_23065 at 5063.079 kb on - strand, within AO353_23065 at 5063.079 kb on - strand, within AO353_23065 at 5063.079 kb on - strand at 5063.081 kb on + strand, within AO353_23065 at 5063.081 kb on + strand, within AO353_23065 at 5063.096 kb on + strand, within AO353_23065 at 5063.097 kb on - strand, within AO353_23065 at 5063.097 kb on - strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.144 kb on + strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065 at 5063.145 kb on - strand, within AO353_23065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 5,059,995 + +0.4 5,059,995 + -0.7 5,059,995 + -1.7 5,059,995 + -1.0 5,059,995 + -1.5 5,059,995 + -0.9 5,059,995 + -0.8 5,059,995 + -0.2 5,059,995 + -0.5 5,059,995 + -1.5 5,059,996 - -0.4 5,059,996 - -0.1 5,059,996 - +0.3 5,059,996 - -2.5 5,059,996 - +1.0 5,059,996 - -0.6 5,059,996 - +0.5 5,059,996 - -0.1 5,060,016 - +0.5 5,060,031 + -0.0 5,060,031 + -0.2 5,060,031 + -0.5 5,060,032 - +0.7 5,060,032 - -0.5 5,060,032 - +0.8 5,060,033 + +0.3 5,060,033 + -0.9 5,060,123 + +0.8 5,060,124 - -1.5 5,060,134 + -2.1 5,060,135 - -0.5 5,060,135 - +0.2 5,060,425 + AO353_23055 0.32 +1.1 5,060,425 + AO353_23055 0.32 -1.1 5,060,426 - AO353_23055 0.32 +2.0 5,060,426 - AO353_23055 0.32 +0.3 5,060,426 - AO353_23055 0.32 -0.5 5,060,426 - AO353_23055 0.32 +1.4 5,060,426 - AO353_23055 0.32 -1.0 5,060,488 + AO353_23055 0.40 -1.5 5,060,488 + AO353_23055 0.40 +0.6 5,060,489 - AO353_23055 0.40 -0.1 5,060,489 - AO353_23055 0.40 +1.1 5,060,489 - AO353_23055 0.40 +0.9 5,060,537 + AO353_23055 0.46 -0.3 5,060,537 + AO353_23055 0.46 -0.0 5,060,537 + AO353_23055 0.46 +1.1 5,060,537 + AO353_23055 0.46 -0.6 5,060,538 - AO353_23055 0.46 -0.1 5,060,797 + AO353_23055 0.78 +0.5 5,060,811 + AO353_23055 0.80 -0.1 5,060,811 + AO353_23055 0.80 +0.1 5,060,811 + AO353_23055 0.80 +0.4 5,060,811 + AO353_23055 0.80 -0.9 5,060,812 - AO353_23055 0.80 -2.8 5,060,812 - AO353_23055 0.80 -0.7 5,060,812 - AO353_23055 0.80 +0.2 5,060,812 - AO353_23055 0.80 -0.7 5,060,812 - AO353_23055 0.80 -0.6 5,060,812 - AO353_23055 0.80 +0.7 5,061,278 + AO353_23060 0.25 -0.9 5,061,278 + AO353_23060 0.25 -0.0 5,061,278 + AO353_23060 0.25 +0.7 5,061,365 + AO353_23060 0.32 +0.1 5,061,365 + AO353_23060 0.32 -0.1 5,061,365 + AO353_23060 0.32 -1.1 5,061,365 + AO353_23060 0.32 -1.0 5,061,366 - AO353_23060 0.32 +0.5 5,061,366 - AO353_23060 0.32 +0.8 5,061,456 + AO353_23060 0.39 -0.5 5,061,457 - AO353_23060 0.39 +0.1 5,061,457 - AO353_23060 0.39 +0.5 5,061,582 + AO353_23060 0.49 +0.9 5,061,582 + AO353_23060 0.49 -0.4 5,061,582 + AO353_23060 0.49 -1.6 5,061,582 + AO353_23060 0.49 +0.4 5,061,582 + AO353_23060 0.49 -0.1 5,061,582 + AO353_23060 0.49 -1.5 5,061,582 + AO353_23060 0.49 +1.1 5,061,582 + AO353_23060 0.49 -0.1 5,061,582 + AO353_23060 0.49 +1.0 5,061,583 - AO353_23060 0.49 +0.5 5,061,583 - AO353_23060 0.49 -0.8 5,061,583 - AO353_23060 0.49 -0.5 5,061,583 - AO353_23060 0.49 -0.7 5,061,586 + AO353_23060 0.49 -0.5 5,061,586 + AO353_23060 0.49 -0.7 5,061,793 + -0.7 5,061,793 + AO353_23060 0.66 -0.5 5,061,794 - AO353_23060 0.66 -0.4 5,061,904 + AO353_23060 0.75 -0.0 5,061,904 + AO353_23060 0.75 +1.1 5,061,905 - AO353_23060 0.75 +0.3 5,061,905 - AO353_23060 0.75 +0.2 5,061,905 - AO353_23060 0.75 +0.5 5,061,905 - AO353_23060 0.75 -0.3 5,062,031 + AO353_23060 0.85 -2.0 5,062,032 - AO353_23060 0.85 -0.6 5,062,032 - AO353_23060 0.85 +0.6 5,062,041 - AO353_23060 0.85 -0.0 5,062,051 + AO353_23060 0.86 +0.7 5,062,051 + AO353_23060 0.86 -1.1 5,062,051 + AO353_23060 0.86 +0.5 5,062,051 + AO353_23060 0.86 -2.9 5,062,051 + AO353_23060 0.86 -0.6 5,062,051 + AO353_23060 0.86 -1.1 5,062,051 + AO353_23060 0.86 +1.2 5,062,051 + AO353_23060 0.86 -0.1 5,062,051 + AO353_23060 0.86 +0.9 5,062,051 + AO353_23060 0.86 +0.9 5,062,051 + AO353_23060 0.86 -1.0 5,062,052 - AO353_23060 0.86 -0.5 5,062,052 - AO353_23060 0.86 +1.2 5,062,052 - AO353_23060 0.86 -1.0 5,062,052 - +0.1 5,062,052 - AO353_23060 0.86 -1.9 5,062,052 - AO353_23060 0.86 -2.1 5,062,054 + AO353_23060 0.86 -1.0 5,062,054 + AO353_23060 0.86 -0.1 5,062,054 + AO353_23060 0.86 -1.1 5,062,054 + AO353_23060 0.86 +1.0 5,062,054 + AO353_23060 0.86 -0.6 5,062,054 + AO353_23060 0.86 -0.6 5,062,054 + AO353_23060 0.86 +0.8 5,062,054 + AO353_23060 0.86 +0.6 5,062,054 + AO353_23060 0.86 +0.7 5,062,055 - AO353_23060 0.87 -0.5 5,062,055 - AO353_23060 0.87 +0.3 5,062,055 - AO353_23060 0.87 +0.5 5,062,055 - AO353_23060 0.87 -0.8 5,062,055 - AO353_23060 0.87 -0.9 5,062,055 - AO353_23060 0.87 -1.2 5,062,055 - AO353_23060 0.87 +1.9 5,062,055 - AO353_23060 0.87 -0.2 5,062,055 - AO353_23060 0.87 +0.5 5,062,223 + +0.2 5,062,223 + -0.7 5,062,259 + +0.1 5,062,565 + AO353_23065 0.23 -1.4 5,062,566 - AO353_23065 0.23 -1.5 5,062,566 - AO353_23065 0.23 -0.6 5,062,566 - AO353_23065 0.23 -1.2 5,062,566 - AO353_23065 0.23 -2.3 5,062,566 - AO353_23065 0.23 -0.8 5,062,616 + AO353_23065 0.27 -0.9 5,062,616 + AO353_23065 0.27 -0.4 5,062,617 - AO353_23065 0.27 -0.3 5,062,617 - AO353_23065 0.27 +1.1 5,062,617 - AO353_23065 0.27 -0.4 5,062,684 - AO353_23065 0.32 -0.9 5,062,788 - AO353_23065 0.40 -0.6 5,062,788 - AO353_23065 0.40 -0.2 5,062,973 + AO353_23065 0.54 -1.5 5,062,973 + AO353_23065 0.54 -0.4 5,062,974 - AO353_23065 0.54 +0.2 5,062,974 - AO353_23065 0.54 -0.1 5,062,997 - AO353_23065 0.56 -0.4 5,063,027 + AO353_23065 0.58 -0.0 5,063,027 + AO353_23065 0.58 -1.1 5,063,027 + AO353_23065 0.58 -0.0 5,063,027 + AO353_23065 0.58 -0.7 5,063,027 + AO353_23065 0.58 -0.7 5,063,045 + AO353_23065 0.59 -1.1 5,063,045 + AO353_23065 0.59 -0.8 5,063,045 + AO353_23065 0.59 +2.4 5,063,045 + AO353_23065 0.59 -0.6 5,063,046 - AO353_23065 0.60 +0.1 5,063,046 - AO353_23065 0.60 -1.1 5,063,046 - AO353_23065 0.60 +1.9 5,063,046 - AO353_23065 0.60 -0.1 5,063,078 + AO353_23065 0.62 +1.1 5,063,078 + AO353_23065 0.62 +1.6 5,063,078 + AO353_23065 0.62 -0.7 5,063,079 - AO353_23065 0.62 +1.4 5,063,079 - AO353_23065 0.62 -1.8 5,063,079 - AO353_23065 0.62 -1.3 5,063,079 - +0.1 5,063,081 + AO353_23065 0.62 +0.1 5,063,081 + AO353_23065 0.62 -0.8 5,063,096 + AO353_23065 0.63 -1.0 5,063,097 - AO353_23065 0.63 -0.4 5,063,097 - AO353_23065 0.63 +1.9 5,063,144 + AO353_23065 0.67 +1.1 5,063,144 + AO353_23065 0.67 +0.3 5,063,144 + AO353_23065 0.67 +0.9 5,063,144 + AO353_23065 0.67 -0.8 5,063,144 + AO353_23065 0.67 -0.6 5,063,144 + AO353_23065 0.67 +0.1 5,063,144 + AO353_23065 0.67 +0.6 5,063,144 + AO353_23065 0.67 -1.1 5,063,144 + AO353_23065 0.67 -0.1 5,063,144 + AO353_23065 0.67 -1.5 5,063,144 + AO353_23065 0.67 +1.4 5,063,145 - AO353_23065 0.67 -0.0 5,063,145 - AO353_23065 0.67 -0.6 5,063,145 - AO353_23065 0.67 -1.4 5,063,145 - AO353_23065 0.67 -1.5 5,063,145 - AO353_23065 0.67 +0.9 5,063,145 - AO353_23065 0.67 -1.2 5,063,145 - AO353_23065 0.67 -0.6 5,063,145 - AO353_23065 0.67 -0.7 5,063,145 - AO353_23065 0.67 +0.4 5,063,145 - AO353_23065 0.67 -0.5 5,063,145 - AO353_23065 0.67 -1.7 5,063,145 - AO353_23065 0.67 -0.5
Or see this region's nucleotide sequence