Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_16845 and AO353_16850 are separated by 136 nucleotides AO353_16850 and AO353_16855 are separated by 111 nucleotides
AO353_16845: AO353_16845 - LysR family transcriptional regulator, at 3,727,662 to 3,728,588
_16845
AO353_16850: AO353_16850 - ferredoxin-NADP reductase, at 3,728,725 to 3,729,504
_16850
AO353_16855: AO353_16855 - tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA, at 3,729,616 to 3,730,314
_16855
Position (kb)
3728
3729
3730 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.759 kb on + strand, within AO353_16845 at 3727.760 kb on - strand, within AO353_16845 at 3727.760 kb on - strand, within AO353_16845 at 3727.769 kb on + strand, within AO353_16845 at 3727.770 kb on - strand, within AO353_16845 at 3727.783 kb on + strand, within AO353_16845 at 3727.783 kb on + strand, within AO353_16845 at 3727.869 kb on + strand, within AO353_16845 at 3727.869 kb on + strand, within AO353_16845 at 3727.870 kb on - strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.871 kb on + strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.872 kb on - strand, within AO353_16845 at 3727.940 kb on + strand, within AO353_16845 at 3727.941 kb on - strand, within AO353_16845 at 3727.941 kb on - strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.118 kb on + strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.119 kb on - strand, within AO353_16845 at 3728.155 kb on - strand, within AO353_16845 at 3728.173 kb on + strand, within AO353_16845 at 3728.278 kb on + strand, within AO353_16845 at 3728.278 kb on + strand, within AO353_16845 at 3728.279 kb on - strand, within AO353_16845 at 3728.574 kb on + strand at 3728.574 kb on + strand at 3728.574 kb on + strand at 3728.579 kb on + strand at 3728.588 kb on + strand at 3728.592 kb on + strand at 3728.634 kb on + strand at 3728.634 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3728.649 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.502 kb on + strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.503 kb on - strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.679 kb on + strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.680 kb on - strand at 3729.707 kb on + strand, within AO353_16855 at 3729.708 kb on - strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.810 kb on + strand, within AO353_16855 at 3729.811 kb on - strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.917 kb on + strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.918 kb on - strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3729.942 kb on + strand, within AO353_16855 at 3730.071 kb on + strand, within AO353_16855 at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.307 kb on + strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.308 kb on - strand at 3730.350 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.440 kb on + strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand at 3730.441 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 3,727,759 + AO353_16845 0.10 -1.4 3,727,759 + AO353_16845 0.10 -0.4 3,727,759 + AO353_16845 0.10 -1.9 3,727,759 + AO353_16845 0.10 -2.0 3,727,759 + AO353_16845 0.10 -0.7 3,727,759 + AO353_16845 0.10 -1.2 3,727,759 + AO353_16845 0.10 -0.2 3,727,760 - AO353_16845 0.11 -1.6 3,727,760 - AO353_16845 0.11 +0.4 3,727,769 + AO353_16845 0.12 -0.6 3,727,770 - AO353_16845 0.12 -1.2 3,727,783 + AO353_16845 0.13 -0.9 3,727,783 + AO353_16845 0.13 +0.2 3,727,869 + AO353_16845 0.22 -1.8 3,727,869 + AO353_16845 0.22 -0.8 3,727,870 - AO353_16845 0.22 -0.8 3,727,871 + AO353_16845 0.23 +1.2 3,727,871 + AO353_16845 0.23 -1.1 3,727,871 + AO353_16845 0.23 +0.3 3,727,871 + AO353_16845 0.23 -0.3 3,727,871 + AO353_16845 0.23 +2.0 3,727,871 + AO353_16845 0.23 -0.1 3,727,871 + AO353_16845 0.23 -1.0 3,727,871 + AO353_16845 0.23 -0.5 3,727,871 + AO353_16845 0.23 -0.1 3,727,871 + AO353_16845 0.23 -0.7 3,727,871 + AO353_16845 0.23 +1.0 3,727,871 + AO353_16845 0.23 -0.5 3,727,871 + AO353_16845 0.23 +0.6 3,727,872 - AO353_16845 0.23 +0.6 3,727,872 - AO353_16845 0.23 -1.9 3,727,872 - AO353_16845 0.23 -1.3 3,727,872 - AO353_16845 0.23 +0.5 3,727,872 - AO353_16845 0.23 +1.0 3,727,872 - AO353_16845 0.23 +1.4 3,727,872 - AO353_16845 0.23 +0.6 3,727,872 - AO353_16845 0.23 -0.4 3,727,872 - AO353_16845 0.23 -1.1 3,727,872 - AO353_16845 0.23 -0.8 3,727,872 - AO353_16845 0.23 -1.2 3,727,872 - AO353_16845 0.23 +0.6 3,727,872 - AO353_16845 0.23 -1.3 3,727,872 - AO353_16845 0.23 -0.2 3,727,940 + AO353_16845 0.30 -0.0 3,727,941 - AO353_16845 0.30 -0.2 3,727,941 - AO353_16845 0.30 -1.1 3,728,118 + AO353_16845 0.49 -0.3 3,728,118 + AO353_16845 0.49 +0.1 3,728,118 + AO353_16845 0.49 -0.2 3,728,118 + AO353_16845 0.49 +0.3 3,728,118 + AO353_16845 0.49 -1.4 3,728,119 - AO353_16845 0.49 -2.5 3,728,119 - AO353_16845 0.49 -0.4 3,728,119 - AO353_16845 0.49 -0.5 3,728,119 - AO353_16845 0.49 -1.2 3,728,155 - AO353_16845 0.53 -1.7 3,728,173 + AO353_16845 0.55 -1.4 3,728,278 + AO353_16845 0.66 -0.4 3,728,278 + AO353_16845 0.66 -1.5 3,728,279 - AO353_16845 0.67 -1.1 3,728,574 + +1.4 3,728,574 + -0.2 3,728,574 + +0.8 3,728,579 + -0.1 3,728,588 + +1.2 3,728,592 + -1.1 3,728,634 + -0.3 3,728,634 + -0.9 3,728,649 + -0.4 3,728,649 + -1.6 3,728,649 + -0.8 3,729,502 + -0.2 3,729,502 + -0.7 3,729,502 + -1.4 3,729,502 + -2.7 3,729,502 + -0.4 3,729,502 + -1.7 3,729,502 + +1.5 3,729,502 + -0.7 3,729,502 + -0.6 3,729,503 - -0.3 3,729,503 - +1.7 3,729,503 - +0.4 3,729,503 - -0.7 3,729,503 - +0.2 3,729,503 - -1.7 3,729,503 - -0.4 3,729,679 + +0.1 3,729,679 + -0.3 3,729,679 + -0.7 3,729,679 + -0.2 3,729,679 + +0.4 3,729,679 + +0.5 3,729,679 + +0.3 3,729,680 - +0.4 3,729,680 - -0.6 3,729,680 - +0.2 3,729,680 - +0.8 3,729,707 + AO353_16855 0.13 -1.6 3,729,708 - AO353_16855 0.13 +0.1 3,729,810 + AO353_16855 0.28 -0.6 3,729,810 + AO353_16855 0.28 -0.6 3,729,811 - AO353_16855 0.28 -1.0 3,729,917 + AO353_16855 0.43 -0.9 3,729,917 + AO353_16855 0.43 -0.4 3,729,918 - AO353_16855 0.43 +0.5 3,729,918 - AO353_16855 0.43 +0.4 3,729,942 + AO353_16855 0.47 +0.2 3,729,942 + AO353_16855 0.47 +0.2 3,730,071 + AO353_16855 0.65 -0.0 3,730,307 + +0.3 3,730,307 + +1.0 3,730,307 + -0.6 3,730,307 + -1.3 3,730,307 + -0.5 3,730,307 + -0.6 3,730,307 + -1.9 3,730,307 + -0.1 3,730,308 - -1.3 3,730,308 - -1.4 3,730,308 - -1.1 3,730,308 - -1.0 3,730,308 - +2.6 3,730,308 - +0.2 3,730,308 - +1.4 3,730,308 - -0.4 3,730,308 - +1.5 3,730,308 - +1.8 3,730,308 - +0.1 3,730,350 + +0.1 3,730,440 + +0.6 3,730,440 + +0.2 3,730,440 + -0.0 3,730,440 + -0.3 3,730,440 + +0.8 3,730,440 + -2.6 3,730,440 + +0.5 3,730,440 + +0.4 3,730,440 + -0.4 3,730,441 - -0.9 3,730,441 - +0.4 3,730,441 - +0.5 3,730,441 - +0.2 3,730,441 - +1.8
Or see this region's nucleotide sequence