Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13875 and AO353_13880 are separated by 118 nucleotides AO353_13880 and AO353_13885 overlap by 14 nucleotides
AO353_13875: AO353_13875 - 3-ketoacyl-ACP reductase, at 3,081,879 to 3,083,231
_13875
AO353_13880: AO353_13880 - acetyl-CoA acetyltransferase, at 3,083,350 to 3,084,627
_13880
AO353_13885: AO353_13885 - bile acid:sodium symporter, at 3,084,614 to 3,085,642
_13885
Position (kb)
3083
3084
3085 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.497 kb on + strand, within AO353_13875 at 3082.498 kb on - strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.666 kb on + strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.667 kb on - strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.735 kb on + strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3082.736 kb on - strand, within AO353_13875 at 3083.026 kb on + strand, within AO353_13875 at 3083.027 kb on - strand, within AO353_13875 at 3083.027 kb on - strand, within AO353_13875 at 3083.027 kb on - strand, within AO353_13875 at 3083.032 kb on + strand, within AO353_13875 at 3083.032 kb on + strand, within AO353_13875 at 3083.032 kb on + strand, within AO353_13875 at 3083.032 kb on + strand, within AO353_13875 at 3083.032 kb on + strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.033 kb on - strand, within AO353_13875 at 3083.218 kb on + strand at 3083.218 kb on + strand at 3083.218 kb on + strand at 3083.218 kb on + strand at 3083.219 kb on - strand at 3083.219 kb on - strand at 3083.219 kb on - strand at 3083.302 kb on + strand at 3083.303 kb on - strand at 3083.303 kb on - strand at 3083.309 kb on + strand at 3083.322 kb on + strand at 3083.323 kb on - strand at 3083.323 kb on - strand at 3083.338 kb on + strand at 3083.338 kb on + strand at 3083.339 kb on - strand at 3083.339 kb on - strand at 3083.339 kb on - strand at 3083.339 kb on - strand at 3083.339 kb on - strand at 3083.339 kb on - strand at 3083.420 kb on - strand at 3083.433 kb on + strand at 3083.479 kb on + strand, within AO353_13880 at 3083.479 kb on + strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.480 kb on - strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.602 kb on + strand, within AO353_13880 at 3083.603 kb on - strand, within AO353_13880 at 3083.603 kb on - strand, within AO353_13880 at 3083.603 kb on - strand, within AO353_13880 at 3084.335 kb on - strand, within AO353_13880 at 3084.335 kb on - strand, within AO353_13880 at 3084.337 kb on + strand, within AO353_13880 at 3084.337 kb on + strand, within AO353_13880 at 3084.338 kb on - strand, within AO353_13880 at 3084.403 kb on + strand, within AO353_13880 at 3084.404 kb on - strand, within AO353_13880 at 3084.615 kb on + strand at 3084.616 kb on - strand at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.720 kb on + strand, within AO353_13885 at 3084.721 kb on - strand, within AO353_13885 at 3084.721 kb on - strand, within AO353_13885 at 3084.721 kb on - strand, within AO353_13885 at 3084.721 kb on - strand, within AO353_13885 at 3084.721 kb on - strand, within AO353_13885 at 3084.941 kb on - strand, within AO353_13885 at 3085.184 kb on + strand, within AO353_13885 at 3085.185 kb on - strand, within AO353_13885 at 3085.209 kb on - strand, within AO353_13885 at 3085.209 kb on - strand, within AO353_13885 at 3085.311 kb on + strand, within AO353_13885 at 3085.311 kb on + strand, within AO353_13885 at 3085.312 kb on - strand, within AO353_13885 at 3085.312 kb on - strand, within AO353_13885 at 3085.312 kb on - strand, within AO353_13885 at 3085.312 kb on - strand, within AO353_13885 at 3085.368 kb on - strand, within AO353_13885 at 3085.376 kb on + strand, within AO353_13885 at 3085.376 kb on + strand, within AO353_13885 at 3085.377 kb on - strand, within AO353_13885 at 3085.377 kb on - strand, within AO353_13885
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 3,082,497 + AO353_13875 0.46 -1.3 3,082,497 + AO353_13875 0.46 +0.1 3,082,497 + AO353_13875 0.46 -0.5 3,082,497 + AO353_13875 0.46 -1.6 3,082,497 + AO353_13875 0.46 +0.6 3,082,497 + AO353_13875 0.46 -0.7 3,082,497 + AO353_13875 0.46 +0.7 3,082,498 - AO353_13875 0.46 +0.4 3,082,666 + AO353_13875 0.58 +1.8 3,082,666 + AO353_13875 0.58 -0.9 3,082,666 + AO353_13875 0.58 -1.4 3,082,666 + AO353_13875 0.58 +1.6 3,082,666 + AO353_13875 0.58 -0.7 3,082,666 + AO353_13875 0.58 -0.0 3,082,666 + AO353_13875 0.58 +0.3 3,082,666 + AO353_13875 0.58 +2.5 3,082,666 + AO353_13875 0.58 -0.8 3,082,666 + AO353_13875 0.58 +0.5 3,082,666 + AO353_13875 0.58 -1.1 3,082,666 + AO353_13875 0.58 +0.1 3,082,666 + AO353_13875 0.58 -1.7 3,082,666 + AO353_13875 0.58 -0.0 3,082,666 + AO353_13875 0.58 -0.5 3,082,666 + AO353_13875 0.58 -0.2 3,082,667 - AO353_13875 0.58 +1.9 3,082,667 - AO353_13875 0.58 -1.4 3,082,667 - AO353_13875 0.58 -0.5 3,082,667 - AO353_13875 0.58 +0.1 3,082,667 - AO353_13875 0.58 +0.7 3,082,667 - AO353_13875 0.58 -0.6 3,082,667 - AO353_13875 0.58 -0.8 3,082,667 - AO353_13875 0.58 +3.6 3,082,667 - AO353_13875 0.58 -0.7 3,082,667 - AO353_13875 0.58 -1.3 3,082,667 - AO353_13875 0.58 -0.1 3,082,667 - AO353_13875 0.58 -1.7 3,082,667 - AO353_13875 0.58 -0.2 3,082,667 - AO353_13875 0.58 +0.2 3,082,667 - AO353_13875 0.58 -2.1 3,082,667 - AO353_13875 0.58 +0.3 3,082,735 + AO353_13875 0.63 +0.2 3,082,735 + AO353_13875 0.63 +0.6 3,082,735 + AO353_13875 0.63 +1.8 3,082,735 + AO353_13875 0.63 -0.0 3,082,735 + AO353_13875 0.63 -0.9 3,082,735 + AO353_13875 0.63 +0.6 3,082,735 + AO353_13875 0.63 -0.2 3,082,735 + AO353_13875 0.63 +1.0 3,082,735 + AO353_13875 0.63 -1.0 3,082,735 + AO353_13875 0.63 -0.9 3,082,735 + AO353_13875 0.63 +0.3 3,082,735 + AO353_13875 0.63 -1.6 3,082,735 + AO353_13875 0.63 -0.6 3,082,736 - AO353_13875 0.63 +1.1 3,082,736 - AO353_13875 0.63 -0.3 3,082,736 - AO353_13875 0.63 +0.1 3,082,736 - AO353_13875 0.63 +0.4 3,082,736 - AO353_13875 0.63 +1.1 3,082,736 - AO353_13875 0.63 -1.7 3,082,736 - AO353_13875 0.63 -0.4 3,082,736 - AO353_13875 0.63 +1.6 3,082,736 - AO353_13875 0.63 +0.4 3,083,026 + AO353_13875 0.85 -0.9 3,083,027 - AO353_13875 0.85 -1.0 3,083,027 - AO353_13875 0.85 -1.5 3,083,027 - AO353_13875 0.85 -0.9 3,083,032 + AO353_13875 0.85 -0.4 3,083,032 + AO353_13875 0.85 +0.1 3,083,032 + AO353_13875 0.85 -0.9 3,083,032 + AO353_13875 0.85 +0.5 3,083,032 + AO353_13875 0.85 -0.3 3,083,033 - AO353_13875 0.85 -1.6 3,083,033 - AO353_13875 0.85 -0.2 3,083,033 - AO353_13875 0.85 +1.1 3,083,033 - AO353_13875 0.85 +0.3 3,083,033 - AO353_13875 0.85 -1.0 3,083,033 - AO353_13875 0.85 -0.7 3,083,218 + -0.2 3,083,218 + -0.0 3,083,218 + -0.0 3,083,218 + +1.6 3,083,219 - -0.4 3,083,219 - -0.0 3,083,219 - -0.3 3,083,302 + +1.1 3,083,303 - -2.1 3,083,303 - -1.0 3,083,309 + -1.0 3,083,322 + +1.6 3,083,323 - +0.5 3,083,323 - -0.3 3,083,338 + +1.3 3,083,338 + -0.2 3,083,339 - -0.4 3,083,339 - +1.3 3,083,339 - +0.6 3,083,339 - +0.8 3,083,339 - -1.6 3,083,339 - -1.0 3,083,420 - -1.5 3,083,433 + +1.3 3,083,479 + AO353_13880 0.10 +0.5 3,083,479 + AO353_13880 0.10 -0.4 3,083,480 - AO353_13880 0.10 +0.7 3,083,480 - AO353_13880 0.10 -1.5 3,083,480 - AO353_13880 0.10 -2.4 3,083,480 - AO353_13880 0.10 -0.4 3,083,480 - AO353_13880 0.10 +0.6 3,083,480 - AO353_13880 0.10 +1.3 3,083,480 - AO353_13880 0.10 -0.3 3,083,480 - AO353_13880 0.10 +1.2 3,083,480 - AO353_13880 0.10 +0.8 3,083,602 + AO353_13880 0.20 -0.4 3,083,602 + AO353_13880 0.20 +0.6 3,083,602 + AO353_13880 0.20 +0.6 3,083,602 + AO353_13880 0.20 -2.2 3,083,602 + AO353_13880 0.20 +0.6 3,083,602 + AO353_13880 0.20 +1.9 3,083,603 - AO353_13880 0.20 -1.9 3,083,603 - AO353_13880 0.20 +1.7 3,083,603 - AO353_13880 0.20 -0.2 3,084,335 - AO353_13880 0.77 -1.3 3,084,335 - AO353_13880 0.77 +1.2 3,084,337 + AO353_13880 0.77 -0.1 3,084,337 + AO353_13880 0.77 -1.1 3,084,338 - AO353_13880 0.77 -1.5 3,084,403 + AO353_13880 0.82 +0.2 3,084,404 - AO353_13880 0.82 -0.5 3,084,615 + +0.6 3,084,616 - +0.6 3,084,720 + AO353_13885 0.10 +0.9 3,084,720 + AO353_13885 0.10 +0.1 3,084,720 + AO353_13885 0.10 -1.0 3,084,720 + AO353_13885 0.10 +0.6 3,084,720 + AO353_13885 0.10 +0.6 3,084,720 + AO353_13885 0.10 +0.3 3,084,720 + AO353_13885 0.10 -0.2 3,084,720 + AO353_13885 0.10 -0.3 3,084,720 + AO353_13885 0.10 +1.1 3,084,720 + AO353_13885 0.10 -1.1 3,084,720 + AO353_13885 0.10 +0.1 3,084,721 - AO353_13885 0.10 -0.9 3,084,721 - AO353_13885 0.10 -0.6 3,084,721 - AO353_13885 0.10 -0.7 3,084,721 - AO353_13885 0.10 -0.0 3,084,721 - AO353_13885 0.10 -0.9 3,084,941 - AO353_13885 0.32 -0.3 3,085,184 + AO353_13885 0.55 -1.0 3,085,185 - AO353_13885 0.55 -0.1 3,085,209 - AO353_13885 0.58 -2.1 3,085,209 - AO353_13885 0.58 -0.2 3,085,311 + AO353_13885 0.68 -1.0 3,085,311 + AO353_13885 0.68 +0.6 3,085,312 - AO353_13885 0.68 -2.5 3,085,312 - AO353_13885 0.68 -1.2 3,085,312 - AO353_13885 0.68 +0.2 3,085,312 - AO353_13885 0.68 -0.3 3,085,368 - AO353_13885 0.73 -0.4 3,085,376 + AO353_13885 0.74 +1.1 3,085,376 + AO353_13885 0.74 +0.1 3,085,377 - AO353_13885 0.74 -1.7 3,085,377 - AO353_13885 0.74 -0.7
Or see this region's nucleotide sequence