Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12855 and AO353_12860 are separated by 337 nucleotides AO353_12860 and AO353_12865 are separated by 11 nucleotides
AO353_12855: AO353_12855 - phosphodiesterase, at 2,841,331 to 2,842,725
_12855
AO353_12860: AO353_12860 - dihydrolipoamide acetyltransferase, at 2,843,063 to 2,844,697
_12860
AO353_12865: AO353_12865 - pyruvate dehydrogenase, at 2,844,709 to 2,847,354
_12865
Position (kb)
2843
2844
2845 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2842.072 kb on + strand, within AO353_12855 at 2842.072 kb on + strand, within AO353_12855 at 2842.073 kb on - strand, within AO353_12855 at 2842.097 kb on + strand, within AO353_12855 at 2842.097 kb on + strand, within AO353_12855 at 2842.097 kb on + strand, within AO353_12855 at 2842.097 kb on + strand, within AO353_12855 at 2842.097 kb on + strand, within AO353_12855 at 2842.098 kb on - strand, within AO353_12855 at 2842.098 kb on - strand, within AO353_12855 at 2842.098 kb on - strand, within AO353_12855 at 2842.098 kb on - strand, within AO353_12855 at 2842.117 kb on + strand, within AO353_12855 at 2842.117 kb on + strand, within AO353_12855 at 2842.118 kb on - strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.126 kb on + strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.127 kb on - strand, within AO353_12855 at 2842.128 kb on + strand, within AO353_12855 at 2842.128 kb on + strand, within AO353_12855 at 2842.128 kb on + strand, within AO353_12855 at 2842.129 kb on - strand, within AO353_12855 at 2842.154 kb on + strand, within AO353_12855 at 2842.154 kb on + strand, within AO353_12855 at 2842.155 kb on - strand, within AO353_12855 at 2842.175 kb on + strand, within AO353_12855 at 2842.195 kb on + strand, within AO353_12855 at 2842.195 kb on + strand, within AO353_12855 at 2842.195 kb on + strand, within AO353_12855 at 2842.195 kb on + strand, within AO353_12855 at 2842.196 kb on - strand, within AO353_12855 at 2842.196 kb on - strand, within AO353_12855 at 2842.196 kb on - strand, within AO353_12855 at 2842.196 kb on - strand, within AO353_12855 at 2842.214 kb on + strand, within AO353_12855 at 2842.215 kb on - strand, within AO353_12855 at 2842.362 kb on + strand, within AO353_12855 at 2842.362 kb on + strand, within AO353_12855 at 2842.362 kb on + strand, within AO353_12855 at 2842.362 kb on + strand, within AO353_12855 at 2842.363 kb on - strand, within AO353_12855 at 2842.363 kb on - strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.364 kb on + strand, within AO353_12855 at 2842.365 kb on - strand, within AO353_12855 at 2842.365 kb on - strand, within AO353_12855 at 2842.365 kb on - strand, within AO353_12855 at 2842.365 kb on - strand, within AO353_12855 at 2842.365 kb on - strand, within AO353_12855 at 2842.409 kb on + strand, within AO353_12855 at 2842.409 kb on + strand, within AO353_12855 at 2842.409 kb on + strand, within AO353_12855 at 2842.410 kb on - strand, within AO353_12855 at 2842.410 kb on - strand, within AO353_12855 at 2842.435 kb on + strand, within AO353_12855 at 2842.435 kb on + strand, within AO353_12855 at 2842.435 kb on + strand, within AO353_12855 at 2842.435 kb on + strand, within AO353_12855 at 2842.435 kb on + strand, within AO353_12855 at 2842.436 kb on - strand, within AO353_12855 at 2842.436 kb on - strand, within AO353_12855 at 2842.436 kb on - strand, within AO353_12855 at 2842.476 kb on + strand, within AO353_12855 at 2842.476 kb on + strand, within AO353_12855 at 2842.503 kb on - strand, within AO353_12855 at 2842.503 kb on - strand, within AO353_12855 at 2842.596 kb on + strand at 2842.618 kb on + strand at 2842.618 kb on + strand at 2842.619 kb on - strand at 2842.619 kb on - strand at 2842.619 kb on - strand at 2842.649 kb on - strand at 2842.680 kb on + strand at 2842.759 kb on + strand at 2842.805 kb on + strand at 2842.805 kb on + strand at 2842.806 kb on - strand at 2842.823 kb on - strand at 2842.826 kb on + strand at 2842.826 kb on + strand at 2842.826 kb on + strand at 2842.826 kb on + strand at 2842.826 kb on + strand at 2842.827 kb on - strand at 2842.833 kb on - strand at 2842.833 kb on - strand at 2842.833 kb on - strand at 2842.836 kb on + strand at 2842.836 kb on + strand at 2842.836 kb on + strand at 2842.836 kb on + strand at 2842.836 kb on + strand at 2842.837 kb on - strand at 2842.862 kb on + strand at 2842.903 kb on + strand at 2842.903 kb on + strand at 2842.903 kb on + strand at 2842.903 kb on + strand at 2842.903 kb on + strand at 2842.903 kb on + strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.904 kb on - strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.907 kb on + strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.908 kb on - strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.938 kb on + strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.939 kb on - strand at 2842.996 kb on + strand at 2842.996 kb on + strand at 2842.997 kb on - strand at 2842.997 kb on - strand at 2842.997 kb on - strand at 2842.997 kb on - strand at 2843.065 kb on - strand at 2843.065 kb on - strand at 2844.963 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,842,072 + AO353_12855 0.53 +0.2 2,842,072 + AO353_12855 0.53 -0.4 2,842,073 - AO353_12855 0.53 +0.4 2,842,097 + AO353_12855 0.55 +0.1 2,842,097 + AO353_12855 0.55 -0.5 2,842,097 + AO353_12855 0.55 -0.5 2,842,097 + AO353_12855 0.55 +0.7 2,842,097 + AO353_12855 0.55 +0.9 2,842,098 - AO353_12855 0.55 -2.2 2,842,098 - AO353_12855 0.55 +0.1 2,842,098 - AO353_12855 0.55 -0.9 2,842,098 - AO353_12855 0.55 -0.5 2,842,117 + AO353_12855 0.56 +1.5 2,842,117 + AO353_12855 0.56 -1.0 2,842,118 - AO353_12855 0.56 -0.3 2,842,126 + AO353_12855 0.57 -0.4 2,842,126 + AO353_12855 0.57 -0.2 2,842,126 + AO353_12855 0.57 +1.6 2,842,126 + AO353_12855 0.57 -0.6 2,842,126 + AO353_12855 0.57 +0.1 2,842,126 + AO353_12855 0.57 +0.0 2,842,126 + AO353_12855 0.57 +0.8 2,842,126 + AO353_12855 0.57 +0.6 2,842,126 + AO353_12855 0.57 +0.4 2,842,126 + AO353_12855 0.57 -0.5 2,842,126 + AO353_12855 0.57 -0.2 2,842,126 + AO353_12855 0.57 +0.1 2,842,126 + AO353_12855 0.57 +2.9 2,842,126 + AO353_12855 0.57 +0.0 2,842,126 + AO353_12855 0.57 +0.6 2,842,126 + AO353_12855 0.57 -0.9 2,842,127 - AO353_12855 0.57 -0.9 2,842,127 - AO353_12855 0.57 +0.5 2,842,127 - AO353_12855 0.57 +0.6 2,842,127 - AO353_12855 0.57 +0.1 2,842,127 - AO353_12855 0.57 -2.7 2,842,127 - AO353_12855 0.57 -1.1 2,842,127 - AO353_12855 0.57 -1.0 2,842,128 + AO353_12855 0.57 -0.5 2,842,128 + AO353_12855 0.57 +0.6 2,842,128 + AO353_12855 0.57 +0.5 2,842,129 - AO353_12855 0.57 -1.3 2,842,154 + AO353_12855 0.59 +0.4 2,842,154 + AO353_12855 0.59 -0.4 2,842,155 - AO353_12855 0.59 -1.3 2,842,175 + AO353_12855 0.61 -1.8 2,842,195 + AO353_12855 0.62 -0.8 2,842,195 + AO353_12855 0.62 +0.4 2,842,195 + AO353_12855 0.62 -0.2 2,842,195 + AO353_12855 0.62 -0.4 2,842,196 - AO353_12855 0.62 +0.2 2,842,196 - AO353_12855 0.62 +2.8 2,842,196 - AO353_12855 0.62 +0.1 2,842,196 - AO353_12855 0.62 +0.1 2,842,214 + AO353_12855 0.63 +0.3 2,842,215 - AO353_12855 0.63 +0.7 2,842,362 + AO353_12855 0.74 +0.0 2,842,362 + AO353_12855 0.74 +0.5 2,842,362 + AO353_12855 0.74 +0.1 2,842,362 + AO353_12855 0.74 -0.3 2,842,363 - AO353_12855 0.74 -0.9 2,842,363 - AO353_12855 0.74 -1.2 2,842,364 + AO353_12855 0.74 +0.1 2,842,364 + AO353_12855 0.74 +0.0 2,842,364 + AO353_12855 0.74 +0.1 2,842,364 + AO353_12855 0.74 +1.3 2,842,364 + AO353_12855 0.74 +0.3 2,842,364 + AO353_12855 0.74 -0.8 2,842,364 + AO353_12855 0.74 -0.0 2,842,364 + AO353_12855 0.74 +1.1 2,842,365 - AO353_12855 0.74 +0.5 2,842,365 - AO353_12855 0.74 +1.6 2,842,365 - AO353_12855 0.74 +0.5 2,842,365 - AO353_12855 0.74 +1.3 2,842,365 - AO353_12855 0.74 +0.8 2,842,409 + AO353_12855 0.77 -0.4 2,842,409 + AO353_12855 0.77 +0.5 2,842,409 + AO353_12855 0.77 +0.1 2,842,410 - AO353_12855 0.77 +1.0 2,842,410 - AO353_12855 0.77 -0.9 2,842,435 + AO353_12855 0.79 -1.5 2,842,435 + AO353_12855 0.79 -1.6 2,842,435 + AO353_12855 0.79 +0.2 2,842,435 + AO353_12855 0.79 -0.5 2,842,435 + AO353_12855 0.79 -1.3 2,842,436 - AO353_12855 0.79 -1.7 2,842,436 - AO353_12855 0.79 -1.0 2,842,436 - AO353_12855 0.79 -0.0 2,842,476 + AO353_12855 0.82 -0.4 2,842,476 + AO353_12855 0.82 +2.2 2,842,503 - AO353_12855 0.84 +1.3 2,842,503 - AO353_12855 0.84 +1.4 2,842,596 + -0.9 2,842,618 + +0.1 2,842,618 + -0.8 2,842,619 - +0.1 2,842,619 - +0.8 2,842,619 - -0.7 2,842,649 - -0.1 2,842,680 + -1.0 2,842,759 + +0.8 2,842,805 + -0.4 2,842,805 + -0.3 2,842,806 - -0.7 2,842,823 - -0.1 2,842,826 + -1.3 2,842,826 + -0.6 2,842,826 + +0.4 2,842,826 + -1.3 2,842,826 + -3.0 2,842,827 - +0.6 2,842,833 - +0.1 2,842,833 - -0.1 2,842,833 - -0.8 2,842,836 + -0.8 2,842,836 + +0.2 2,842,836 + -0.8 2,842,836 + +1.2 2,842,836 + +0.0 2,842,837 - +0.6 2,842,862 + +2.0 2,842,903 + +0.9 2,842,903 + -0.2 2,842,903 + +0.1 2,842,903 + +0.1 2,842,903 + -1.2 2,842,903 + +0.3 2,842,904 - -0.9 2,842,904 - -1.0 2,842,904 - -1.1 2,842,904 - +0.9 2,842,904 - +0.3 2,842,904 - +2.2 2,842,904 - -2.2 2,842,904 - -2.0 2,842,904 - +1.1 2,842,904 - -2.0 2,842,904 - +0.9 2,842,907 + -1.7 2,842,907 + +0.1 2,842,907 + -0.9 2,842,907 + -0.7 2,842,907 + +1.3 2,842,907 + -0.4 2,842,907 + -1.2 2,842,907 + +0.3 2,842,908 - +2.1 2,842,908 - +0.9 2,842,908 - -0.2 2,842,908 - +0.6 2,842,908 - +0.2 2,842,908 - -1.3 2,842,908 - +0.6 2,842,908 - -0.5 2,842,908 - +1.6 2,842,938 + +0.9 2,842,938 + -0.8 2,842,938 + +1.1 2,842,938 + +0.1 2,842,938 + -0.5 2,842,938 + +0.3 2,842,938 + +1.2 2,842,938 + +0.4 2,842,938 + +0.5 2,842,938 + -2.2 2,842,938 + +0.1 2,842,939 - -0.0 2,842,939 - +1.0 2,842,939 - +0.8 2,842,939 - -0.9 2,842,939 - +0.3 2,842,939 - -0.2 2,842,939 - +0.7 2,842,939 - +1.1 2,842,939 - +0.6 2,842,939 - -0.6 2,842,996 + +0.3 2,842,996 + +2.8 2,842,997 - +0.6 2,842,997 - -0.5 2,842,997 - +0.5 2,842,997 - -0.1 2,843,065 - +0.1 2,843,065 - +0.3 2,844,963 - +1.1
Or see this region's nucleotide sequence