Experiment: L-Isoleucine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12200 and AO353_12205 are separated by 299 nucleotides AO353_12205 and AO353_12210 are separated by 3 nucleotides AO353_12210 and AO353_12215 are separated by 129 nucleotides
AO353_12200: AO353_12200 - hypothetical protein, at 2,683,563 to 2,684,927
_12200
AO353_12205: AO353_12205 - fructose 1,6-bisphosphatase, at 2,685,227 to 2,686,237
_12205
AO353_12210: AO353_12210 - hypothetical protein, at 2,686,241 to 2,686,843
_12210
AO353_12215: AO353_12215 - chemotaxis protein, at 2,686,973 to 2,688,853
_12215
Position (kb)
2685
2686
2687 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2684.268 kb on + strand, within AO353_12200 at 2684.269 kb on - strand, within AO353_12200 at 2684.269 kb on - strand, within AO353_12200 at 2684.269 kb on - strand, within AO353_12200 at 2684.331 kb on + strand, within AO353_12200 at 2684.331 kb on + strand, within AO353_12200 at 2684.331 kb on + strand, within AO353_12200 at 2684.331 kb on + strand, within AO353_12200 at 2684.331 kb on + strand, within AO353_12200 at 2684.604 kb on + strand, within AO353_12200 at 2684.604 kb on + strand, within AO353_12200 at 2684.604 kb on + strand, within AO353_12200 at 2684.605 kb on - strand, within AO353_12200 at 2684.655 kb on + strand, within AO353_12200 at 2684.684 kb on + strand, within AO353_12200 at 2684.685 kb on - strand, within AO353_12200 at 2684.724 kb on + strand, within AO353_12200 at 2684.725 kb on - strand, within AO353_12200 at 2684.725 kb on - strand, within AO353_12200 at 2684.995 kb on - strand at 2685.003 kb on + strand at 2685.003 kb on + strand at 2685.003 kb on + strand at 2685.003 kb on + strand at 2685.009 kb on + strand at 2685.009 kb on + strand at 2685.010 kb on - strand at 2685.023 kb on - strand at 2685.023 kb on - strand at 2685.023 kb on - strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.095 kb on + strand at 2685.111 kb on + strand at 2685.111 kb on + strand at 2685.111 kb on + strand at 2685.112 kb on - strand at 2685.136 kb on + strand at 2685.136 kb on + strand at 2685.136 kb on + strand at 2685.157 kb on + strand at 2685.157 kb on + strand at 2685.157 kb on + strand at 2686.235 kb on + strand at 2686.236 kb on - strand at 2686.236 kb on - strand at 2686.236 kb on - strand at 2686.326 kb on + strand, within AO353_12210 at 2686.326 kb on + strand, within AO353_12210 at 2686.326 kb on + strand, within AO353_12210 at 2686.326 kb on + strand, within AO353_12210 at 2686.326 kb on + strand, within AO353_12210 at 2686.327 kb on - strand, within AO353_12210 at 2686.327 kb on - strand, within AO353_12210 at 2686.327 kb on - strand, within AO353_12210 at 2686.327 kb on - strand, within AO353_12210 at 2686.327 kb on - strand, within AO353_12210 at 2686.455 kb on + strand, within AO353_12210 at 2686.455 kb on + strand, within AO353_12210 at 2686.455 kb on + strand, within AO353_12210 at 2686.456 kb on - strand, within AO353_12210 at 2686.456 kb on - strand, within AO353_12210 at 2686.456 kb on - strand, within AO353_12210 at 2686.456 kb on - strand, within AO353_12210 at 2686.598 kb on + strand, within AO353_12210 at 2686.598 kb on + strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.599 kb on - strand, within AO353_12210 at 2686.719 kb on - strand, within AO353_12210 at 2686.795 kb on + strand at 2686.795 kb on + strand at 2686.795 kb on + strand at 2686.841 kb on + strand at 2686.841 kb on + strand at 2686.841 kb on + strand at 2686.971 kb on + strand at 2686.971 kb on + strand at 2686.972 kb on - strand at 2686.972 kb on - strand at 2686.972 kb on - strand at 2686.972 kb on - strand at 2686.974 kb on + strand at 2686.974 kb on + strand at 2686.974 kb on + strand at 2686.974 kb on + strand at 2686.974 kb on + strand at 2686.975 kb on - strand at 2686.975 kb on - strand at 2686.975 kb on - strand at 2686.975 kb on - strand at 2686.975 kb on - strand at 2686.975 kb on - strand at 2686.987 kb on + strand at 2686.988 kb on - strand at 2686.988 kb on - strand at 2687.164 kb on + strand, within AO353_12215
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (C) remove 2,684,268 + AO353_12200 0.52 -0.2 2,684,269 - AO353_12200 0.52 -0.6 2,684,269 - AO353_12200 0.52 +0.2 2,684,269 - AO353_12200 0.52 -0.0 2,684,331 + AO353_12200 0.56 -0.9 2,684,331 + AO353_12200 0.56 +1.0 2,684,331 + AO353_12200 0.56 +0.8 2,684,331 + AO353_12200 0.56 -0.2 2,684,331 + AO353_12200 0.56 +1.9 2,684,604 + AO353_12200 0.76 -0.5 2,684,604 + AO353_12200 0.76 -0.6 2,684,604 + AO353_12200 0.76 -1.4 2,684,605 - AO353_12200 0.76 +1.3 2,684,655 + AO353_12200 0.80 +1.2 2,684,684 + AO353_12200 0.82 +1.3 2,684,685 - AO353_12200 0.82 +0.6 2,684,724 + AO353_12200 0.85 -1.4 2,684,725 - AO353_12200 0.85 -0.3 2,684,725 - AO353_12200 0.85 +1.0 2,684,995 - -0.7 2,685,003 + -0.1 2,685,003 + -0.8 2,685,003 + -1.0 2,685,003 + +1.3 2,685,009 + +0.4 2,685,009 + -0.2 2,685,010 - -0.0 2,685,023 - +0.8 2,685,023 - -0.4 2,685,023 - -2.6 2,685,095 + -0.9 2,685,095 + +0.4 2,685,095 + +0.5 2,685,095 + -0.2 2,685,095 + +0.4 2,685,095 + -0.8 2,685,095 + +0.9 2,685,095 + -0.8 2,685,095 + -1.7 2,685,111 + +0.2 2,685,111 + -0.5 2,685,111 + -1.8 2,685,112 - -0.2 2,685,136 + +1.4 2,685,136 + -0.2 2,685,136 + -0.0 2,685,157 + -1.7 2,685,157 + +0.6 2,685,157 + +0.1 2,686,235 + -2.1 2,686,236 - +1.1 2,686,236 - -2.1 2,686,236 - +0.5 2,686,326 + AO353_12210 0.14 -1.0 2,686,326 + AO353_12210 0.14 -1.3 2,686,326 + AO353_12210 0.14 +0.5 2,686,326 + AO353_12210 0.14 +0.8 2,686,326 + AO353_12210 0.14 -1.0 2,686,327 - AO353_12210 0.14 -0.1 2,686,327 - AO353_12210 0.14 -0.2 2,686,327 - AO353_12210 0.14 -0.3 2,686,327 - AO353_12210 0.14 -1.4 2,686,327 - AO353_12210 0.14 +0.6 2,686,455 + AO353_12210 0.35 -1.4 2,686,455 + AO353_12210 0.35 +0.1 2,686,455 + AO353_12210 0.35 -0.4 2,686,456 - AO353_12210 0.36 -0.3 2,686,456 - AO353_12210 0.36 -0.4 2,686,456 - AO353_12210 0.36 +2.1 2,686,456 - AO353_12210 0.36 -0.1 2,686,598 + AO353_12210 0.59 -1.2 2,686,598 + AO353_12210 0.59 +1.1 2,686,599 - AO353_12210 0.59 +0.7 2,686,599 - AO353_12210 0.59 -2.1 2,686,599 - AO353_12210 0.59 -0.2 2,686,599 - AO353_12210 0.59 +1.2 2,686,599 - AO353_12210 0.59 -1.2 2,686,599 - AO353_12210 0.59 +0.5 2,686,719 - AO353_12210 0.79 +0.1 2,686,795 + +0.6 2,686,795 + +0.7 2,686,795 + -1.7 2,686,841 + +0.6 2,686,841 + +0.6 2,686,841 + -1.3 2,686,971 + +1.1 2,686,971 + +1.3 2,686,972 - +3.3 2,686,972 - -0.5 2,686,972 - +0.0 2,686,972 - +2.0 2,686,974 + +0.3 2,686,974 + +0.2 2,686,974 + -2.4 2,686,974 + -1.3 2,686,974 + +1.7 2,686,975 - -1.0 2,686,975 - -0.4 2,686,975 - -0.7 2,686,975 - -0.3 2,686,975 - -0.2 2,686,975 - -1.2 2,686,987 + -0.6 2,686,988 - -0.8 2,686,988 - -0.5 2,687,164 + AO353_12215 0.10 +0.6
Or see this region's nucleotide sequence