Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37095

Experiment: R2A with Bacitracin 0.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Bacitracin 0.5 mg/ml
3,786,168	+				-0.7
3,786,168	+				+0.4
3,786,169	-				-0.0
3,786,169	-				-0.7
3,786,243	+				-0.1
3,786,244	-				+0.0
3,786,244	-				+0.1
3,786,244	-				-0.5
3,786,246	+				+1.3
3,786,246	+				+0.2
3,786,246	+				-0.3
3,786,246	+				+0.3
3,786,247	-				+0.3
3,786,247	-				+0.2
3,786,311	+				+0.8
3,786,311	+				-0.7
3,786,312	-				-0.7
3,786,312	-				+0.4
3,786,312	-				-1.2
3,786,312	-				+0.1
3,786,314	-				+0.7
3,786,353	-		RR42_RS37090	0.12	-0.8
3,786,353	-		RR42_RS37090	0.12	+0.1
3,786,388	+		RR42_RS37090	0.15	-0.5
3,786,443	-		RR42_RS37090	0.21	-0.1
3,786,443	-		RR42_RS37090	0.21	-0.8
3,786,463	+		RR42_RS37090	0.24	+0.3
3,786,565	+		RR42_RS37090	0.35	+0.3
3,786,565	+		RR42_RS37090	0.35	+0.8
3,786,565	+		RR42_RS37090	0.35	+1.0
3,786,566	-		RR42_RS37090	0.35	+0.1
3,786,580	+		RR42_RS37090	0.36	+1.0
3,786,616	+		RR42_RS37090	0.40	+0.6
3,786,617	-		RR42_RS37090	0.40	+0.3
3,786,693	+		RR42_RS37090	0.49	-0.8
3,786,693	+		RR42_RS37090	0.49	+0.7
3,786,694	-		RR42_RS37090	0.49	+0.3
3,786,813	-		RR42_RS37090	0.62	-0.2
3,786,852	+		RR42_RS37090	0.66	-0.1
3,786,852	+		RR42_RS37090	0.66	+0.2
3,786,853	-		RR42_RS37090	0.66	+0.4
3,786,853	-		RR42_RS37090	0.66	-2.1
3,786,857	-		RR42_RS37090	0.67	+0.7
3,786,857	-		RR42_RS37090	0.67	-0.9
3,786,857	-		RR42_RS37090	0.67	+0.6
3,786,978	+		RR42_RS37090	0.80	-0.3
3,786,979	-		RR42_RS37090	0.80	+0.2
3,786,979	-		RR42_RS37090	0.80	-1.6
3,786,979	-		RR42_RS37090	0.80	+0.0
3,786,987	+		RR42_RS37090	0.81	-2.1
3,786,987	+		RR42_RS37090	0.81	-0.3
3,786,987	+		RR42_RS37090	0.81	+0.0
3,787,185	+				+0.0
3,787,185	+				+0.1
3,787,185	+				-1.5
3,787,186	-				+0.4
3,787,186	-				+0.7
3,787,201	+				+0.2
3,787,201	+				-1.1
3,787,226	+				-1.9
3,787,227	-				+0.5
3,787,227	-				-0.3
3,787,332	+		RR42_RS37095	0.21	+0.7
3,787,333	-		RR42_RS37095	0.21	-0.2
3,787,457	+		RR42_RS37095	0.36	+1.1
3,787,462	+		RR42_RS37095	0.36	+0.5
3,787,462	+		RR42_RS37095	0.36	+0.7
3,787,572	-		RR42_RS37095	0.49	-0.4
3,787,572	-		RR42_RS37095	0.49	+0.4
3,787,692	+		RR42_RS37095	0.64	+0.2
3,787,692	+		RR42_RS37095	0.64	+0.8
3,787,692	+		RR42_RS37095	0.64	+0.2
3,787,693	-		RR42_RS37095	0.64	+0.2
3,787,693	-		RR42_RS37095	0.64	+0.6
3,787,701	+		RR42_RS37095	0.65	+0.6
3,787,702	-		RR42_RS37095	0.65	-0.3
3,787,798	+		RR42_RS37095	0.76	+0.8
3,787,864	-		RR42_RS37095	0.84	+0.4
3,787,893	+		RR42_RS37095	0.88	+0.7
3,787,965	+				-0.1
3,787,966	-				+1.8
3,788,003	+				-0.3
3,788,004	-				+0.4
3,788,016	+				+0.0
3,788,016	+				+0.5
3,788,017	-				+0.4
3,788,017	-				+0.3
3,788,017	-				+0.4
3,788,056	+				+0.7
3,788,123	+				+0.2
3,788,123	+				+0.2
3,788,124	-				+1.3
3,788,246	+				-0.8
3,788,246	+				-0.2
3,788,341	+				+0.4
3,788,341	+				+0.1
3,788,342	-				-1.0
3,788,403	+				+0.4
3,788,453	-				-0.0
3,788,453	-				+0.2
3,788,500	+				-0.3
3,788,500	+				+0.8
3,788,500	+				-1.1
3,788,501	-				+1.3
3,788,549	+				-0.0
3,788,549	+				-0.0
3,788,549	+				-1.2
3,788,550	-				+1.0
3,788,632	-				+0.4
3,788,674	+				+0.3
3,788,737	+				+0.1
3,788,738	-				+0.7
3,788,738	-				+0.7
3,788,738	-				+0.6
3,788,738	-				-0.9
3,788,800	-				+0.1
3,788,800	-				+0.1
3,788,882	+		RR42_RS37105	0.19	+0.5
3,788,896	+		RR42_RS37105	0.24	+0.1
3,788,897	+		RR42_RS37105	0.25	-1.1
3,788,898	-		RR42_RS37105	0.25	+1.3
3,788,898	-		RR42_RS37105	0.25	-0.9
3,788,898	-		RR42_RS37105	0.25	+2.8
3,788,900	+		RR42_RS37105	0.26	+0.9
3,788,901	-		RR42_RS37105	0.26	+1.4
3,788,901	-		RR42_RS37105	0.26	+0.0
3,788,901	-		RR42_RS37105	0.26	-0.2
3,788,901	-		RR42_RS37105	0.26	+0.3
3,788,909	+		RR42_RS37105	0.30	-1.1
3,788,909	+		RR42_RS37105	0.30	+0.2
3,788,910	-		RR42_RS37105	0.30	-1.0
3,788,910	-		RR42_RS37105	0.30	-0.6
3,788,910	-		RR42_RS37105	0.30	-0.1
3,788,910	-		RR42_RS37105	0.30	+0.7
3,788,910	-		RR42_RS37105	0.30	-0.3
3,788,912	+		RR42_RS37105	0.31	+0.6
3,788,912	+		RR42_RS37105	0.31	+0.2
3,788,913	-		RR42_RS37105	0.31	+1.4
3,788,955	+		RR42_RS37105	0.48	+0.3
3,788,955	+		RR42_RS37105	0.48	-0.6
3,788,956	-		RR42_RS37105	0.49	-0.6